Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32415

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,666,042	+				-2.3
2,666,528	+				-0.1
2,666,528	+				+0.2
2,666,529	-				-0.5
2,667,033	+				+0.3
2,667,033	+				-1.5
2,667,034	-				+1.3
2,667,057	-				-0.3
2,667,057	-				-1.6
2,667,295	+		RR42_RS32415	0.24	+0.9
2,667,379	+		RR42_RS32415	0.30	-0.4
2,667,421	+		RR42_RS32415	0.34	+0.5
2,667,422	-		RR42_RS32415	0.34	-0.5
2,667,422	-		RR42_RS32415	0.34	+0.3
2,667,422	-		RR42_RS32415	0.34	-0.9
2,667,422	-		RR42_RS32415	0.34	-0.1
2,667,574	+		RR42_RS32415	0.46	+0.1
2,667,575	-		RR42_RS32415	0.46	+0.1
2,667,631	+		RR42_RS32415	0.51	+0.4
2,667,632	-		RR42_RS32415	0.51	+1.0
2,668,025	-		RR42_RS32415	0.83	-0.5
2,668,480	+				-0.6
2,668,480	+				-0.3
2,668,720	+		RR42_RS32420	0.15	-1.9
2,668,721	-		RR42_RS32420	0.15	+0.5
2,668,721	-		RR42_RS32420	0.15	-0.4
2,668,795	+		RR42_RS32420	0.17	+1.2
2,668,796	-		RR42_RS32420	0.17	+0.9
2,668,796	-		RR42_RS32420	0.17	-0.4
2,668,837	+		RR42_RS32420	0.18	+1.2
2,669,013	+		RR42_RS32420	0.24	+1.8
2,669,074	+		RR42_RS32420	0.26	-0.4
2,669,075	-		RR42_RS32420	0.26	+0.2
2,669,075	-		RR42_RS32420	0.26	-0.4
2,669,076	+		RR42_RS32420	0.26	-0.5
2,669,092	+		RR42_RS32420	0.26	-0.7
2,669,092	+		RR42_RS32420	0.26	+0.0
2,669,092	+		RR42_RS32420	0.26	-0.5
2,669,093	-		RR42_RS32420	0.26	+0.0
2,669,093	-		RR42_RS32420	0.26	+0.4
2,669,093	-		RR42_RS32420	0.26	-1.7
2,669,198	-		RR42_RS32420	0.29	-0.9
2,669,231	-		RR42_RS32420	0.30	+0.8