Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26390

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,276,526	-		RR42_RS26385	0.34	+0.7
1,277,044	+		RR42_RS26385	0.72	+0.4
1,277,045	-		RR42_RS26385	0.72	+0.5
1,277,045	-		RR42_RS26385	0.72	+1.1
1,277,471	+				-0.2
1,277,527	-				+0.3
1,277,528	+				-1.0
1,277,528	+				+0.4
1,277,528	+				+0.4
1,277,528	+				-0.4
1,277,903	+		RR42_RS26390	0.22	+0.4
1,277,908	-		RR42_RS26390	0.22	-0.1
1,277,908	-		RR42_RS26390	0.22	-0.6
1,278,064	-		RR42_RS26390	0.30	-0.3
1,278,389	+		RR42_RS26390	0.46	-0.0
1,278,390	-		RR42_RS26390	0.46	+0.7
1,278,524	+		RR42_RS26390	0.53	+0.9
1,278,525	-		RR42_RS26390	0.53	-0.6
1,278,525	-		RR42_RS26390	0.53	-0.1
1,278,930	+		RR42_RS26390	0.73	+0.9
1,279,182	-		RR42_RS26390	0.86	+0.4
1,279,195	-		RR42_RS26390	0.86	+1.1
1,279,625	-		RR42_RS26395	0.14	+1.9
1,279,831	+		RR42_RS26395	0.32	+0.0
1,279,963	-		RR42_RS26395	0.44	-1.5
1,279,963	-		RR42_RS26395	0.44	+0.1
1,280,047	+		RR42_RS26395	0.51	-1.1
1,280,047	+		RR42_RS26395	0.51	+1.0
1,280,047	+		RR42_RS26395	0.51	+0.7
1,280,048	-		RR42_RS26395	0.51	-0.4
1,280,048	-		RR42_RS26395	0.51	+1.7
1,280,374	+		RR42_RS26395	0.80	+1.1
1,280,430	+		RR42_RS26395	0.85	+0.6
1,280,430	+		RR42_RS26395	0.85	+0.5
1,280,431	-		RR42_RS26395	0.85	+0.9