Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4440 and Psyr_4441 are separated by 327 nucleotides Psyr_4441 and Psyr_4442 are separated by 277 nucleotides
Psyr_4440: Psyr_4440 - Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal, at 5,306,648 to 5,307,592
_4440
Psyr_4441: Psyr_4441 - heat shock protein YegD, at 5,307,920 to 5,309,185
_4441
Psyr_4442: Psyr_4442 - membrane protein, putative, at 5,309,463 to 5,310,473
_4442
Position (kb) 5307
5308
5309
5310 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5306.988 kb on + strand, within Psyr_4440 at 5306.989 kb on - strand, within Psyr_4440 at 5307.046 kb on + strand, within Psyr_4440 at 5307.100 kb on + strand, within Psyr_4440 at 5307.400 kb on - strand, within Psyr_4440 at 5307.400 kb on - strand, within Psyr_4440 at 5307.429 kb on - strand, within Psyr_4440 at 5307.435 kb on + strand, within Psyr_4440 at 5307.435 kb on + strand, within Psyr_4440 at 5307.435 kb on + strand, within Psyr_4440 at 5307.435 kb on + strand, within Psyr_4440 at 5307.436 kb on - strand, within Psyr_4440 at 5307.436 kb on - strand, within Psyr_4440 at 5307.498 kb on + strand at 5307.498 kb on + strand at 5307.498 kb on + strand at 5307.499 kb on - strand at 5307.499 kb on - strand at 5307.499 kb on - strand at 5307.499 kb on - strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.566 kb on + strand at 5307.567 kb on - strand at 5307.567 kb on - strand at 5307.573 kb on + strand at 5307.573 kb on + strand at 5307.573 kb on + strand at 5307.573 kb on + strand at 5307.574 kb on - strand at 5307.574 kb on - strand at 5307.574 kb on - strand at 5307.576 kb on + strand at 5307.576 kb on + strand at 5307.577 kb on - strand at 5307.577 kb on - strand at 5307.594 kb on + strand at 5307.595 kb on - strand at 5307.631 kb on + strand at 5307.632 kb on - strand at 5307.680 kb on - strand at 5307.683 kb on + strand at 5307.684 kb on - strand at 5307.696 kb on + strand at 5307.696 kb on + strand at 5307.698 kb on + strand at 5307.699 kb on - strand at 5307.704 kb on + strand at 5307.704 kb on + strand at 5307.705 kb on - strand at 5307.733 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.746 kb on + strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.747 kb on - strand at 5307.779 kb on + strand at 5307.780 kb on - strand at 5307.825 kb on + strand at 5307.825 kb on + strand at 5307.826 kb on - strand at 5307.835 kb on + strand at 5307.836 kb on - strand at 5307.836 kb on - strand at 5307.836 kb on - strand at 5307.836 kb on - strand at 5307.836 kb on - strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.839 kb on + strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.840 kb on - strand at 5307.841 kb on + strand at 5307.842 kb on - strand at 5307.842 kb on - strand at 5307.842 kb on - strand at 5307.881 kb on + strand at 5307.881 kb on + strand at 5307.881 kb on + strand at 5307.881 kb on + strand at 5307.912 kb on + strand at 5307.912 kb on + strand at 5307.912 kb on + strand at 5307.913 kb on - strand at 5307.913 kb on - strand at 5307.913 kb on - strand at 5307.913 kb on - strand at 5308.037 kb on - strand at 5308.086 kb on - strand, within Psyr_4441 at 5308.086 kb on - strand, within Psyr_4441 at 5308.121 kb on + strand, within Psyr_4441 at 5308.122 kb on - strand, within Psyr_4441 at 5308.122 kb on - strand, within Psyr_4441 at 5308.122 kb on - strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.667 kb on + strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.668 kb on - strand, within Psyr_4441 at 5308.687 kb on + strand, within Psyr_4441 at 5308.687 kb on + strand, within Psyr_4441 at 5308.687 kb on + strand, within Psyr_4441 at 5308.687 kb on + strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.688 kb on - strand, within Psyr_4441 at 5308.724 kb on + strand, within Psyr_4441 at 5308.725 kb on - strand, within Psyr_4441 at 5308.763 kb on + strand, within Psyr_4441 at 5309.184 kb on - strand at 5309.275 kb on + strand at 5309.384 kb on + strand at 5309.384 kb on + strand at 5309.384 kb on + strand at 5309.385 kb on - strand at 5309.385 kb on - strand at 5309.427 kb on + strand at 5309.447 kb on + strand at 5309.448 kb on - strand at 5309.448 kb on - strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.451 kb on + strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.452 kb on - strand at 5309.500 kb on + strand at 5309.501 kb on - strand at 5309.501 kb on - strand at 5309.501 kb on - strand at 5309.501 kb on - strand at 5309.501 kb on - strand at 5309.501 kb on - strand at 5309.506 kb on + strand at 5309.506 kb on + strand at 5309.506 kb on + strand at 5309.507 kb on - strand at 5309.507 kb on - strand at 5309.509 kb on + strand at 5309.509 kb on + strand at 5309.509 kb on + strand at 5309.509 kb on + strand at 5309.509 kb on + strand at 5309.509 kb on + strand at 5309.510 kb on - strand at 5309.510 kb on - strand at 5309.629 kb on + strand, within Psyr_4442 at 5309.629 kb on + strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.630 kb on - strand, within Psyr_4442 at 5309.832 kb on + strand, within Psyr_4442 at 5309.840 kb on + strand, within Psyr_4442 at 5309.840 kb on + strand, within Psyr_4442 at 5309.840 kb on + strand, within Psyr_4442 at 5309.841 kb on - strand, within Psyr_4442 at 5309.841 kb on - strand, within Psyr_4442 at 5309.841 kb on - strand, within Psyr_4442 at 5309.911 kb on + strand, within Psyr_4442 at 5309.966 kb on + strand, within Psyr_4442 at 5309.967 kb on - strand, within Psyr_4442 at 5309.967 kb on - strand, within Psyr_4442 at 5309.967 kb on - strand, within Psyr_4442 at 5310.121 kb on + strand, within Psyr_4442 at 5310.121 kb on + strand, within Psyr_4442 at 5310.121 kb on + strand, within Psyr_4442 at 5310.121 kb on + strand, within Psyr_4442 at 5310.121 kb on + strand, within Psyr_4442
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,306,988 + Psyr_4440 0.36 -0.7 5,306,989 - Psyr_4440 0.36 -0.6 5,307,046 + Psyr_4440 0.42 +0.3 5,307,100 + Psyr_4440 0.48 +0.2 5,307,400 - Psyr_4440 0.80 +0.2 5,307,400 - Psyr_4440 0.80 +1.0 5,307,429 - Psyr_4440 0.83 -0.9 5,307,435 + Psyr_4440 0.83 +0.2 5,307,435 + Psyr_4440 0.83 -1.9 5,307,435 + Psyr_4440 0.83 +1.8 5,307,435 + Psyr_4440 0.83 -0.5 5,307,436 - Psyr_4440 0.83 +0.9 5,307,436 - Psyr_4440 0.83 +1.9 5,307,498 + +0.2 5,307,498 + +0.6 5,307,498 + +0.6 5,307,499 - -0.1 5,307,499 - +0.6 5,307,499 - +0.0 5,307,499 - -0.2 5,307,566 + +0.7 5,307,566 + -0.1 5,307,566 + -0.7 5,307,566 + -3.0 5,307,566 + +0.6 5,307,566 + +0.9 5,307,566 + -0.6 5,307,566 + +0.1 5,307,566 + -0.3 5,307,566 + -0.1 5,307,567 - -0.1 5,307,567 - -1.1 5,307,573 + -1.4 5,307,573 + +1.0 5,307,573 + +1.2 5,307,573 + +0.0 5,307,574 - -0.7 5,307,574 - -1.1 5,307,574 - +1.5 5,307,576 + -2.4 5,307,576 + -1.4 5,307,577 - +0.1 5,307,577 - +0.2 5,307,594 + +0.6 5,307,595 - -1.9 5,307,631 + +1.1 5,307,632 - -0.2 5,307,680 - +0.3 5,307,683 + +1.4 5,307,684 - -0.3 5,307,696 + +0.9 5,307,696 + -0.3 5,307,698 + +0.2 5,307,699 - +0.1 5,307,704 + +0.9 5,307,704 + +0.1 5,307,705 - +0.2 5,307,733 + -0.3 5,307,746 + +0.5 5,307,746 + -0.7 5,307,746 + +0.9 5,307,746 + -0.1 5,307,746 + +0.2 5,307,746 + +0.1 5,307,746 + +0.2 5,307,746 + -1.1 5,307,746 + +0.3 5,307,746 + -0.8 5,307,746 + -0.7 5,307,746 + -0.1 5,307,746 + +2.0 5,307,746 + -0.1 5,307,746 + -0.0 5,307,747 - -0.1 5,307,747 - +0.1 5,307,747 - -0.1 5,307,747 - +0.2 5,307,747 - -1.1 5,307,747 - +0.5 5,307,747 - +0.6 5,307,747 - +0.7 5,307,779 + -0.1 5,307,780 - -0.6 5,307,825 + -0.0 5,307,825 + -0.3 5,307,826 - +0.0 5,307,835 + -0.7 5,307,836 - -1.9 5,307,836 - -0.3 5,307,836 - -0.7 5,307,836 - -0.0 5,307,836 - +0.6 5,307,839 + -0.6 5,307,839 + -0.6 5,307,839 + -1.6 5,307,839 + +0.9 5,307,839 + -0.0 5,307,839 + +1.9 5,307,839 + -2.0 5,307,839 + +2.2 5,307,840 - -0.2 5,307,840 - +0.3 5,307,840 - +0.5 5,307,840 - -0.1 5,307,840 - -0.5 5,307,840 - +1.1 5,307,840 - -0.3 5,307,840 - -0.7 5,307,840 - +0.5 5,307,840 - +0.9 5,307,841 + +0.7 5,307,842 - +0.9 5,307,842 - +1.4 5,307,842 - -1.0 5,307,881 + +1.5 5,307,881 + -0.2 5,307,881 + +1.1 5,307,881 + +0.2 5,307,912 + +1.0 5,307,912 + +0.7 5,307,912 + -0.7 5,307,913 - +0.5 5,307,913 - +0.3 5,307,913 - -1.3 5,307,913 - -0.1 5,308,037 - -0.7 5,308,086 - Psyr_4441 0.13 -0.7 5,308,086 - Psyr_4441 0.13 -0.2 5,308,121 + Psyr_4441 0.16 +0.7 5,308,122 - Psyr_4441 0.16 -0.2 5,308,122 - Psyr_4441 0.16 +0.0 5,308,122 - Psyr_4441 0.16 -0.2 5,308,667 + Psyr_4441 0.59 +0.9 5,308,667 + Psyr_4441 0.59 +3.5 5,308,667 + Psyr_4441 0.59 +0.6 5,308,667 + Psyr_4441 0.59 -0.2 5,308,667 + Psyr_4441 0.59 +0.5 5,308,667 + Psyr_4441 0.59 -0.1 5,308,667 + Psyr_4441 0.59 -0.2 5,308,667 + Psyr_4441 0.59 -0.3 5,308,667 + Psyr_4441 0.59 -0.8 5,308,667 + Psyr_4441 0.59 +0.2 5,308,667 + Psyr_4441 0.59 -0.4 5,308,668 - Psyr_4441 0.59 -0.1 5,308,668 - Psyr_4441 0.59 -2.1 5,308,668 - Psyr_4441 0.59 +1.9 5,308,668 - Psyr_4441 0.59 +0.6 5,308,668 - Psyr_4441 0.59 -0.7 5,308,668 - Psyr_4441 0.59 +1.1 5,308,668 - Psyr_4441 0.59 +0.1 5,308,668 - Psyr_4441 0.59 +0.4 5,308,668 - Psyr_4441 0.59 +0.7 5,308,668 - Psyr_4441 0.59 +0.2 5,308,668 - Psyr_4441 0.59 -1.1 5,308,668 - Psyr_4441 0.59 +0.4 5,308,687 + Psyr_4441 0.61 +0.2 5,308,687 + Psyr_4441 0.61 -0.3 5,308,687 + Psyr_4441 0.61 +0.4 5,308,687 + Psyr_4441 0.61 -0.9 5,308,688 - Psyr_4441 0.61 +0.3 5,308,688 - Psyr_4441 0.61 +0.2 5,308,688 - Psyr_4441 0.61 +0.3 5,308,688 - Psyr_4441 0.61 -1.5 5,308,688 - Psyr_4441 0.61 +0.0 5,308,688 - Psyr_4441 0.61 +0.4 5,308,688 - Psyr_4441 0.61 -1.4 5,308,724 + Psyr_4441 0.64 -0.6 5,308,725 - Psyr_4441 0.64 -0.8 5,308,763 + Psyr_4441 0.67 -0.6 5,309,184 - +0.5 5,309,275 + -0.1 5,309,384 + -0.8 5,309,384 + +0.9 5,309,384 + -0.1 5,309,385 - -0.0 5,309,385 - +0.7 5,309,427 + -0.2 5,309,447 + +0.6 5,309,448 - -0.3 5,309,448 - +1.4 5,309,451 + +0.2 5,309,451 + -0.2 5,309,451 + -0.3 5,309,451 + +0.5 5,309,451 + +0.3 5,309,451 + +1.0 5,309,451 + -0.1 5,309,451 + -0.8 5,309,451 + +0.0 5,309,451 + +0.9 5,309,451 + -1.9 5,309,451 + +0.2 5,309,451 + +0.2 5,309,451 + -1.3 5,309,451 + +0.9 5,309,452 - +0.4 5,309,452 - +2.1 5,309,452 - +1.1 5,309,452 - -0.5 5,309,452 - -0.4 5,309,452 - +0.7 5,309,452 - +0.6 5,309,452 - +1.1 5,309,452 - +0.9 5,309,500 + -0.8 5,309,501 - +0.2 5,309,501 - +1.0 5,309,501 - +0.3 5,309,501 - -0.3 5,309,501 - +0.3 5,309,501 - -1.0 5,309,506 + -0.3 5,309,506 + +0.2 5,309,506 + -0.3 5,309,507 - +0.4 5,309,507 - -0.2 5,309,509 + +0.4 5,309,509 + +0.5 5,309,509 + +2.1 5,309,509 + -0.2 5,309,509 + +1.2 5,309,509 + +1.4 5,309,510 - -0.9 5,309,510 - -0.3 5,309,629 + Psyr_4442 0.16 +0.9 5,309,629 + Psyr_4442 0.16 -0.3 5,309,630 - Psyr_4442 0.17 -0.2 5,309,630 - Psyr_4442 0.17 +0.3 5,309,630 - Psyr_4442 0.17 +0.5 5,309,630 - Psyr_4442 0.17 +0.9 5,309,630 - Psyr_4442 0.17 -0.4 5,309,630 - Psyr_4442 0.17 +0.1 5,309,630 - Psyr_4442 0.17 +0.6 5,309,832 + Psyr_4442 0.36 -1.4 5,309,840 + Psyr_4442 0.37 +1.9 5,309,840 + Psyr_4442 0.37 -0.1 5,309,840 + Psyr_4442 0.37 +0.8 5,309,841 - Psyr_4442 0.37 -0.8 5,309,841 - Psyr_4442 0.37 +1.2 5,309,841 - Psyr_4442 0.37 +0.2 5,309,911 + Psyr_4442 0.44 -0.2 5,309,966 + Psyr_4442 0.50 -0.6 5,309,967 - Psyr_4442 0.50 -0.1 5,309,967 - Psyr_4442 0.50 -1.0 5,309,967 - Psyr_4442 0.50 -0.4 5,310,121 + Psyr_4442 0.65 +0.4 5,310,121 + Psyr_4442 0.65 -3.0 5,310,121 + Psyr_4442 0.65 +0.7 5,310,121 + Psyr_4442 0.65 -0.1 5,310,121 + Psyr_4442 0.65 +0.7
Or see this region's nucleotide sequence