Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0905 and Psyr_0906 are separated by 377 nucleotides Psyr_0906 and Psyr_0907 are separated by 158 nucleotides Psyr_0907 and Psyr_0908 are separated by 131 nucleotides
Psyr_0905: Psyr_0905 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 1,024,669 to 1,026,591
_0905
Psyr_0906: Psyr_0906 - Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer, at 1,026,969 to 1,028,849
_0906
Psyr_0907: Psyr_0907 - conserved hypothetical protein, at 1,029,008 to 1,029,271
_0907
Psyr_0908: Psyr_0908 - FMN-dependent alpha-hydroxy acid dehydrogenase, at 1,029,403 to 1,030,545
_0908
Position (kb) 1026
1027
1028
1029 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1026.027 kb on - strand, within Psyr_0905 at 1026.042 kb on - strand, within Psyr_0905 at 1026.042 kb on - strand, within Psyr_0905 at 1026.326 kb on + strand, within Psyr_0905 at 1026.368 kb on - strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand, within Psyr_0905 at 1026.395 kb on + strand at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.396 kb on - strand, within Psyr_0905 at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.444 kb on + strand at 1026.445 kb on - strand at 1026.445 kb on - strand at 1026.445 kb on - strand at 1026.445 kb on - strand at 1026.463 kb on - strand at 1026.463 kb on - strand at 1026.530 kb on - strand at 1026.530 kb on - strand at 1026.559 kb on - strand at 1026.585 kb on + strand at 1026.586 kb on - strand at 1026.626 kb on - strand at 1026.626 kb on - strand at 1026.626 kb on - strand at 1026.639 kb on - strand at 1026.645 kb on + strand at 1026.645 kb on + strand at 1026.645 kb on + strand at 1026.645 kb on + strand at 1026.646 kb on - strand at 1026.646 kb on - strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.667 kb on + strand at 1026.668 kb on - strand at 1026.668 kb on - strand at 1026.668 kb on - strand at 1026.668 kb on - strand at 1026.668 kb on - strand at 1026.669 kb on + strand at 1026.669 kb on + strand at 1026.669 kb on + strand at 1026.669 kb on + strand at 1026.669 kb on + strand at 1026.669 kb on + strand at 1026.670 kb on - strand at 1026.670 kb on - strand at 1026.670 kb on - strand at 1026.776 kb on + strand at 1026.777 kb on - strand at 1026.778 kb on + strand at 1026.779 kb on - strand at 1026.779 kb on - strand at 1026.779 kb on - strand at 1026.779 kb on - strand at 1026.779 kb on - strand at 1026.779 kb on - strand at 1026.779 kb on - strand at 1026.804 kb on - strand at 1026.976 kb on + strand at 1026.976 kb on + strand at 1026.989 kb on + strand at 1026.990 kb on - strand at 1026.990 kb on - strand at 1027.015 kb on + strand at 1027.016 kb on - strand at 1027.047 kb on + strand at 1027.048 kb on - strand at 1027.048 kb on - strand at 1027.056 kb on + strand at 1027.067 kb on + strand at 1027.067 kb on + strand at 1027.067 kb on + strand at 1027.067 kb on + strand at 1027.068 kb on - strand at 1027.068 kb on - strand at 1027.068 kb on - strand at 1027.068 kb on - strand at 1027.186 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.263 kb on + strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.264 kb on - strand, within Psyr_0906 at 1027.347 kb on + strand, within Psyr_0906 at 1027.347 kb on + strand, within Psyr_0906 at 1027.347 kb on + strand, within Psyr_0906 at 1027.347 kb on + strand, within Psyr_0906 at 1027.348 kb on - strand, within Psyr_0906 at 1027.392 kb on + strand, within Psyr_0906 at 1027.393 kb on - strand, within Psyr_0906 at 1027.618 kb on - strand, within Psyr_0906 at 1027.694 kb on + strand, within Psyr_0906 at 1027.694 kb on + strand, within Psyr_0906 at 1027.695 kb on - strand, within Psyr_0906 at 1027.728 kb on + strand, within Psyr_0906 at 1027.728 kb on + strand, within Psyr_0906 at 1027.729 kb on - strand, within Psyr_0906 at 1027.729 kb on - strand, within Psyr_0906 at 1027.729 kb on - strand, within Psyr_0906 at 1027.761 kb on + strand, within Psyr_0906 at 1027.761 kb on + strand, within Psyr_0906 at 1027.762 kb on - strand, within Psyr_0906 at 1027.889 kb on + strand, within Psyr_0906 at 1027.889 kb on + strand, within Psyr_0906 at 1027.889 kb on + strand, within Psyr_0906 at 1027.890 kb on - strand, within Psyr_0906 at 1028.014 kb on + strand, within Psyr_0906 at 1028.015 kb on - strand, within Psyr_0906 at 1028.015 kb on - strand, within Psyr_0906 at 1028.015 kb on - strand, within Psyr_0906 at 1028.015 kb on - strand, within Psyr_0906 at 1028.135 kb on + strand, within Psyr_0906 at 1028.136 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.255 kb on - strand, within Psyr_0906 at 1028.548 kb on + strand, within Psyr_0906 at 1028.704 kb on + strand at 1028.704 kb on + strand at 1028.745 kb on - strand at 1028.768 kb on + strand at 1028.853 kb on + strand at 1028.853 kb on + strand at 1028.853 kb on + strand at 1028.853 kb on + strand at 1028.853 kb on + strand at 1028.853 kb on + strand at 1028.854 kb on - strand at 1028.854 kb on - strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.881 kb on + strand at 1028.882 kb on - strand at 1028.882 kb on - strand at 1028.882 kb on - strand at 1028.882 kb on - strand at 1028.882 kb on - strand at 1028.882 kb on - strand at 1028.882 kb on - strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.883 kb on + strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.884 kb on - strand at 1028.888 kb on - strand at 1028.919 kb on + strand at 1028.919 kb on + strand at 1028.919 kb on + strand at 1028.919 kb on + strand at 1028.920 kb on - strand at 1029.076 kb on + strand, within Psyr_0907 at 1029.076 kb on + strand, within Psyr_0907 at 1029.076 kb on + strand, within Psyr_0907 at 1029.077 kb on - strand, within Psyr_0907 at 1029.077 kb on - strand, within Psyr_0907 at 1029.258 kb on - strand at 1029.258 kb on - strand at 1029.265 kb on + strand at 1029.265 kb on + strand at 1029.326 kb on + strand at 1029.326 kb on + strand at 1029.326 kb on + strand at 1029.326 kb on + strand at 1029.326 kb on + strand at 1029.327 kb on - strand at 1029.327 kb on - strand at 1029.327 kb on - strand at 1029.498 kb on + strand at 1029.507 kb on + strand at 1029.507 kb on + strand at 1029.507 kb on + strand at 1029.508 kb on - strand at 1029.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 1,026,027 - Psyr_0905 0.71 -2.0 1,026,042 - Psyr_0905 0.71 -0.3 1,026,042 - Psyr_0905 0.71 -0.4 1,026,326 + Psyr_0905 0.86 +1.4 1,026,368 - Psyr_0905 0.88 +0.1 1,026,395 + Psyr_0905 0.90 -0.5 1,026,395 + Psyr_0905 0.90 -0.0 1,026,395 + Psyr_0905 0.90 +0.8 1,026,395 + Psyr_0905 0.90 +0.8 1,026,395 + Psyr_0905 0.90 +0.4 1,026,395 + Psyr_0905 0.90 -0.2 1,026,395 + Psyr_0905 0.90 -0.2 1,026,395 + Psyr_0905 0.90 +3.2 1,026,395 + Psyr_0905 0.90 -0.7 1,026,395 + Psyr_0905 0.90 -0.3 1,026,395 + Psyr_0905 0.90 -0.5 1,026,395 + +0.8 1,026,396 - Psyr_0905 0.90 +0.4 1,026,396 - Psyr_0905 0.90 -0.9 1,026,396 - Psyr_0905 0.90 +0.3 1,026,396 - Psyr_0905 0.90 -0.1 1,026,396 - Psyr_0905 0.90 -2.4 1,026,396 - Psyr_0905 0.90 -1.3 1,026,396 - Psyr_0905 0.90 +0.1 1,026,396 - Psyr_0905 0.90 -0.4 1,026,396 - Psyr_0905 0.90 -1.2 1,026,396 - Psyr_0905 0.90 -0.1 1,026,396 - Psyr_0905 0.90 +0.7 1,026,396 - Psyr_0905 0.90 -1.3 1,026,396 - Psyr_0905 0.90 +1.0 1,026,396 - Psyr_0905 0.90 +0.5 1,026,396 - Psyr_0905 0.90 +0.4 1,026,444 + -1.1 1,026,444 + -1.2 1,026,444 + -0.7 1,026,444 + -1.2 1,026,444 + -0.2 1,026,444 + +1.5 1,026,444 + -0.7 1,026,444 + -0.5 1,026,445 - -0.7 1,026,445 - +0.3 1,026,445 - +0.1 1,026,445 - +1.3 1,026,463 - -0.4 1,026,463 - -1.3 1,026,530 - -2.2 1,026,530 - +0.4 1,026,559 - +0.3 1,026,585 + +1.3 1,026,586 - +0.4 1,026,626 - +0.0 1,026,626 - +0.5 1,026,626 - -0.0 1,026,639 - +0.6 1,026,645 + +0.1 1,026,645 + +0.5 1,026,645 + -0.7 1,026,645 + -0.7 1,026,646 - -0.2 1,026,646 - +2.2 1,026,667 + -0.6 1,026,667 + +0.3 1,026,667 + +1.6 1,026,667 + +0.6 1,026,667 + +0.0 1,026,667 + +0.4 1,026,667 + +0.8 1,026,667 + -1.0 1,026,668 - +0.6 1,026,668 - -0.4 1,026,668 - +2.0 1,026,668 - -0.7 1,026,668 - -0.0 1,026,669 + +0.3 1,026,669 + +0.6 1,026,669 + -0.5 1,026,669 + -0.7 1,026,669 + -0.1 1,026,669 + -0.2 1,026,670 - +0.1 1,026,670 - +0.8 1,026,670 - +0.3 1,026,776 + +1.1 1,026,777 - +0.3 1,026,778 + +1.8 1,026,779 - +1.2 1,026,779 - -1.1 1,026,779 - -0.5 1,026,779 - -0.7 1,026,779 - -0.4 1,026,779 - +0.4 1,026,779 - -0.7 1,026,804 - -0.1 1,026,976 + +0.7 1,026,976 + -1.7 1,026,989 + +1.2 1,026,990 - +0.6 1,026,990 - -0.3 1,027,015 + -0.2 1,027,016 - -0.2 1,027,047 + +1.4 1,027,048 - +1.1 1,027,048 - +0.2 1,027,056 + +1.1 1,027,067 + +0.2 1,027,067 + +0.6 1,027,067 + +0.0 1,027,067 + -0.5 1,027,068 - +0.6 1,027,068 - +1.3 1,027,068 - +0.3 1,027,068 - +0.1 1,027,186 + Psyr_0906 0.12 +0.1 1,027,263 + Psyr_0906 0.16 +0.1 1,027,263 + Psyr_0906 0.16 +0.9 1,027,263 + Psyr_0906 0.16 +1.3 1,027,263 + Psyr_0906 0.16 -0.7 1,027,263 + Psyr_0906 0.16 +0.1 1,027,263 + Psyr_0906 0.16 -0.7 1,027,263 + Psyr_0906 0.16 +0.6 1,027,263 + Psyr_0906 0.16 +2.0 1,027,263 + Psyr_0906 0.16 +0.3 1,027,263 + Psyr_0906 0.16 +0.8 1,027,263 + Psyr_0906 0.16 +0.5 1,027,263 + Psyr_0906 0.16 -0.1 1,027,264 - Psyr_0906 0.16 +0.7 1,027,264 - Psyr_0906 0.16 +0.1 1,027,264 - Psyr_0906 0.16 +0.4 1,027,264 - Psyr_0906 0.16 -0.5 1,027,264 - Psyr_0906 0.16 +0.5 1,027,264 - Psyr_0906 0.16 +0.8 1,027,264 - Psyr_0906 0.16 -0.2 1,027,264 - Psyr_0906 0.16 +0.9 1,027,347 + Psyr_0906 0.20 +1.1 1,027,347 + Psyr_0906 0.20 +0.6 1,027,347 + Psyr_0906 0.20 +0.3 1,027,347 + Psyr_0906 0.20 +0.5 1,027,348 - Psyr_0906 0.20 -1.5 1,027,392 + Psyr_0906 0.22 +1.8 1,027,393 - Psyr_0906 0.23 +0.1 1,027,618 - Psyr_0906 0.35 +0.1 1,027,694 + Psyr_0906 0.39 -0.4 1,027,694 + Psyr_0906 0.39 -0.1 1,027,695 - Psyr_0906 0.39 +0.8 1,027,728 + Psyr_0906 0.40 -0.4 1,027,728 + Psyr_0906 0.40 -0.3 1,027,729 - Psyr_0906 0.40 +0.1 1,027,729 - Psyr_0906 0.40 +0.5 1,027,729 - Psyr_0906 0.40 -0.2 1,027,761 + Psyr_0906 0.42 +0.2 1,027,761 + Psyr_0906 0.42 -1.4 1,027,762 - Psyr_0906 0.42 -0.6 1,027,889 + Psyr_0906 0.49 +0.5 1,027,889 + Psyr_0906 0.49 -0.7 1,027,889 + Psyr_0906 0.49 +0.5 1,027,890 - Psyr_0906 0.49 +1.7 1,028,014 + Psyr_0906 0.56 -0.0 1,028,015 - Psyr_0906 0.56 -0.5 1,028,015 - Psyr_0906 0.56 +0.7 1,028,015 - Psyr_0906 0.56 +1.0 1,028,015 - Psyr_0906 0.56 +1.0 1,028,135 + Psyr_0906 0.62 -0.7 1,028,136 - Psyr_0906 0.62 +0.3 1,028,255 - Psyr_0906 0.68 -0.7 1,028,255 - Psyr_0906 0.68 -0.4 1,028,255 - Psyr_0906 0.68 +0.8 1,028,255 - Psyr_0906 0.68 -0.7 1,028,255 - Psyr_0906 0.68 -0.1 1,028,255 - Psyr_0906 0.68 -1.5 1,028,255 - Psyr_0906 0.68 +1.4 1,028,548 + Psyr_0906 0.84 +0.8 1,028,704 + +0.8 1,028,704 + -0.5 1,028,745 - +0.0 1,028,768 + +0.4 1,028,853 + +0.4 1,028,853 + +0.5 1,028,853 + -1.1 1,028,853 + +0.1 1,028,853 + -1.2 1,028,853 + +1.6 1,028,854 - -0.9 1,028,854 - +2.4 1,028,881 + +1.0 1,028,881 + +0.1 1,028,881 + +0.3 1,028,881 + +0.8 1,028,881 + +0.6 1,028,881 + +0.1 1,028,881 + -0.0 1,028,881 + +0.7 1,028,881 + +0.8 1,028,881 + +0.6 1,028,881 + +0.3 1,028,882 - +2.5 1,028,882 - -1.3 1,028,882 - +0.8 1,028,882 - +1.0 1,028,882 - +0.9 1,028,882 - -0.8 1,028,882 - -0.2 1,028,883 + -0.8 1,028,883 + -0.1 1,028,883 + +0.3 1,028,883 + -0.7 1,028,883 + -0.8 1,028,883 + -0.6 1,028,883 + +0.8 1,028,883 + -0.4 1,028,883 + +0.5 1,028,883 + +1.5 1,028,883 + +0.0 1,028,883 + -1.2 1,028,883 + -0.5 1,028,883 + -0.0 1,028,883 + -0.3 1,028,883 + -1.9 1,028,883 + +1.8 1,028,883 + +1.0 1,028,883 + +3.2 1,028,884 - -1.2 1,028,884 - +0.8 1,028,884 - +0.8 1,028,884 - +0.5 1,028,884 - +0.7 1,028,884 - +0.8 1,028,884 - +0.4 1,028,884 - +0.2 1,028,884 - -2.6 1,028,884 - -1.0 1,028,884 - +0.3 1,028,884 - +0.0 1,028,884 - +0.8 1,028,884 - +0.2 1,028,884 - -1.0 1,028,884 - +0.8 1,028,888 - +0.5 1,028,919 + +1.0 1,028,919 + -0.4 1,028,919 + +0.6 1,028,919 + -0.2 1,028,920 - +0.7 1,029,076 + Psyr_0907 0.26 +0.4 1,029,076 + Psyr_0907 0.26 -1.5 1,029,076 + Psyr_0907 0.26 +0.5 1,029,077 - Psyr_0907 0.26 -1.9 1,029,077 - Psyr_0907 0.26 -1.0 1,029,258 - -1.1 1,029,258 - +0.0 1,029,265 + -1.9 1,029,265 + -1.2 1,029,326 + +0.8 1,029,326 + +1.4 1,029,326 + -0.4 1,029,326 + +0.0 1,029,326 + +0.3 1,029,327 - +2.4 1,029,327 - -0.2 1,029,327 - +0.8 1,029,498 + +0.8 1,029,507 + -1.9 1,029,507 + +1.2 1,029,507 + -0.3 1,029,508 - +0.7 1,029,508 - -0.8
Or see this region's nucleotide sequence