Strain Fitness in Pseudomonas sp. S08-1 around OH686_15135

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,176,469	+		OH686_15125	0.74	-2.5
3,176,470	-		OH686_15125	0.74	-3.0
3,176,470	-		OH686_15125	0.74	-3.3
3,176,470	-		OH686_15125	0.74	-0.8
3,176,655	+		OH686_15125	0.87	-2.8
3,176,655	+		OH686_15125	0.87	-2.3
3,176,656	-		OH686_15125	0.87	-0.5
3,176,842	+				-2.5
3,176,843	-				-1.6
3,176,847	+				-0.2
3,176,847	+				+0.0
3,176,847	+				+0.8
3,176,848	-				+0.8
3,176,848	-				+0.2
3,176,848	-				-0.9
3,176,848	-				-0.7
3,176,848	-				+0.5
3,176,848	-				+0.2
3,176,879	-				-2.7
3,176,879	-				-1.9
3,176,882	+				-1.9
3,176,882	+				-0.9
3,176,882	+				-3.9
3,176,882	+				-1.6
3,176,882	+				-1.7
3,176,882	+				-1.4
3,176,882	+				+1.5
3,176,882	+				-0.9
3,176,882	+				-1.0
3,176,882	+				-1.5
3,176,883	-				-0.6
3,176,883	-				-2.0
3,176,883	-				-3.4
3,176,883	-				-1.5
3,176,893	+				-2.9
3,176,893	+				-0.1
3,176,893	+				-1.5
3,176,893	+				-1.2
3,176,897	+				-1.4
3,176,897	+				-1.0
3,176,897	+				-1.3
3,176,897	+				-1.8
3,176,897	+				-1.3
3,176,897	+				-1.6
3,176,898	-				-1.2
3,176,898	-				-0.4
3,176,898	-				-0.8
3,176,898	-				-1.9
3,176,898	-				-3.0
3,176,898	-				-1.3
3,176,898	-				-1.1
3,176,898	-				-2.1
3,176,912	+				-1.4
3,176,912	+				-2.0
3,176,913	-				-1.8
3,176,913	-				-2.9
3,177,240	-		OH686_15130	0.64	-1.0
3,177,504	+				-1.1
3,177,504	+				-2.2
3,177,505	-				-0.7
3,177,844	+		OH686_15135	0.37	-3.8
3,178,192	+		OH686_15135	0.70	-1.9
3,178,383	+		OH686_15135	0.89	-3.5
3,178,383	+		OH686_15135	0.89	+0.5
3,178,383	+		OH686_15135	0.89	-1.4
3,178,384	-		OH686_15135	0.89	-1.3
3,178,384	-		OH686_15135	0.89	-1.2
3,178,384	-		OH686_15135	0.89	-3.5
3,178,467	+				-1.3
3,178,468	-				-2.8
3,178,475	+				+0.2
3,178,475	+				-0.7
3,178,475	+				-0.8
3,178,476	-				-1.7
3,178,476	-				-1.3
3,178,750	-		OH686_15140	0.30	-0.4
3,178,750	-		OH686_15140	0.30	-1.5
3,178,750	-		OH686_15140	0.30	-2.8
3,178,750	-		OH686_15140	0.30	-1.2
3,178,750	-		OH686_15140	0.30	-1.9
3,178,818	+		OH686_15140	0.38	-2.3
3,178,818	+		OH686_15140	0.38	-0.3
3,178,819	-		OH686_15140	0.39	-2.9
3,178,819	-		OH686_15140	0.39	-2.2
3,178,891	+		OH686_15140	0.47	-2.4
3,178,891	+		OH686_15140	0.47	-1.4
3,178,891	+		OH686_15140	0.47	-1.8
3,178,891	+		OH686_15140	0.47	-1.4
3,178,892	-		OH686_15140	0.47	-2.2
3,178,892	-		OH686_15140	0.47	-0.5
3,178,892	-		OH686_15140	0.47	-2.4
3,178,954	+		OH686_15140	0.55	-0.6
3,178,954	+		OH686_15140	0.55	-3.5
3,178,954	+		OH686_15140	0.55	-1.7
3,178,954	+		OH686_15140	0.55	-2.1
3,178,954	+		OH686_15140	0.55	-3.5
3,178,954	+		OH686_15140	0.55	-2.3
3,178,954	+		OH686_15140	0.55	-0.1
3,178,954	+		OH686_15140	0.55	-3.4
3,178,954	+		OH686_15140	0.55	-1.8
3,178,954	+		OH686_15140	0.55	-2.5
3,178,954	+		OH686_15140	0.55	-1.0
3,178,954	+		OH686_15140	0.55	-1.9
3,178,954	+		OH686_15140	0.55	-1.6
3,178,954	+		OH686_15140	0.55	-3.0
3,178,954	+		OH686_15140	0.55	-1.6
3,178,954	+		OH686_15140	0.55	-2.3
3,178,954	+		OH686_15140	0.55	-2.3
3,178,954	+		OH686_15140	0.55	-2.0
3,178,954	+		OH686_15140	0.55	-0.5
3,178,954	+		OH686_15140	0.55	-1.6
3,178,954	+		OH686_15140	0.55	-1.9
3,178,954	+		OH686_15140	0.55	-1.5
3,178,954	+		OH686_15140	0.55	-1.6
3,178,954	+		OH686_15140	0.55	-2.7
3,178,954	+		OH686_15140	0.55	-0.9
3,178,954	+		OH686_15140	0.55	-3.1
3,178,954	+		OH686_15140	0.55	-3.1
3,178,954	+		OH686_15140	0.55	-2.8
3,178,955	-		OH686_15140	0.55	+0.6
3,178,955	-		OH686_15140	0.55	-1.4
3,178,955	-		OH686_15140	0.55	-3.0
3,178,955	-		OH686_15140	0.55	-2.0
3,178,955	-		OH686_15140	0.55	-2.2
3,178,955	-		OH686_15140	0.55	-0.7
3,178,955	-		OH686_15140	0.55	-1.8
3,178,955	-		OH686_15140	0.55	-0.4
3,178,955	-		OH686_15140	0.55	-1.4
3,178,955	-		OH686_15140	0.55	-1.9
3,178,955	-		OH686_15140	0.55	-2.7
3,178,955	-		OH686_15140	0.55	-1.2
3,178,955	-		OH686_15140	0.55	-2.4
3,178,955	-		OH686_15140	0.55	-0.7
3,178,955	-		OH686_15140	0.55	-1.3
3,178,955	-		OH686_15140	0.55	-3.3
3,178,955	-		OH686_15140	0.55	-2.0
3,178,955	-		OH686_15140	0.55	-0.6
3,178,955	-		OH686_15140	0.55	-1.4
3,178,955	-		OH686_15140	0.55	-0.6
3,178,955	-		OH686_15140	0.55	-1.3
3,178,955	-		OH686_15140	0.55	-3.8
3,178,955	-		OH686_15140	0.55	-2.5
3,178,955	-		OH686_15140	0.55	-2.0
3,178,955	-		OH686_15140	0.55	-1.9
3,178,955	-		OH686_15140	0.55	-2.9
3,178,955	-		OH686_15140	0.55	-2.3
3,178,958	+		OH686_15140	0.55	-1.3
3,178,958	+		OH686_15140	0.55	-1.8
3,178,958	+		OH686_15140	0.55	-2.7
3,178,958	+		OH686_15140	0.55	-2.9
3,178,958	+		OH686_15140	0.55	-1.0
3,178,958	+		OH686_15140	0.55	+0.9
3,178,958	+		OH686_15140	0.55	-2.9
3,178,958	+		OH686_15140	0.55	-1.1
3,178,959	-		OH686_15140	0.55	-2.2
3,178,959	-		OH686_15140	0.55	-3.5
3,178,959	-		OH686_15140	0.55	-0.4
3,178,959	-		OH686_15140	0.55	-4.0
3,178,959	-		OH686_15140	0.55	-2.2
3,178,959	-		OH686_15140	0.55	-0.9
3,178,959	-		OH686_15140	0.55	-0.8
3,178,959	-		OH686_15140	0.55	-1.7
3,179,220	+		OH686_15140	0.87	-3.2
3,179,220	+		OH686_15140	0.87	-0.8
3,179,220	+		OH686_15140	0.87	-1.5
3,179,220	+		OH686_15140	0.87	-0.9
3,179,220	+		OH686_15140	0.87	-0.9
3,179,220	+		OH686_15140	0.87	-1.8
3,179,220	+		OH686_15140	0.87	-2.2
3,179,221	-		OH686_15140	0.87	-2.9
3,179,221	-		OH686_15140	0.87	-1.9
3,179,221	-		OH686_15140	0.87	-0.7
3,179,221	-		OH686_15140	0.87	-3.1
3,179,221	-		OH686_15140	0.87	+0.7
3,179,221	-		OH686_15140	0.87	-0.5
3,179,221	-		OH686_15140	0.87	-1.9
3,179,342	+				-2.9
3,179,343	-				+0.3
3,179,372	+				-0.1
3,179,373	-				+0.7
3,179,373	-				-0.1
3,179,392	+				-0.6
3,179,392	+				-0.0
3,179,393	-				-1.6
3,179,403	+				-0.2
3,179,432	+				+0.0
3,179,432	+				-0.7
3,179,432	+				+0.6
3,179,432	+				+0.6
3,179,432	+				+0.4
3,179,432	+				-0.1
3,179,432	+				+1.2
3,179,432	+				-1.1
3,179,432	+				+1.2
3,179,432	+				+0.4
3,179,432	+				-0.1
3,179,433	-				-0.9
3,179,433	-				+0.1
3,179,433	-				-1.3
3,179,433	-				+0.6
3,179,433	-				+0.8
3,179,433	-				+0.4
3,179,441	+				+0.6
3,179,441	+				+1.2
3,179,441	+				-0.3
3,179,441	+				+0.9
3,179,441	+				+0.1
3,179,441	+				+0.6
3,179,441	+				-0.3
3,179,441	+				+0.5
3,179,442	-				-0.2
3,179,442	-				-0.3
3,179,442	-				-0.3