Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS05585

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
1,203,886	+				-1.0
1,203,887	-				-0.0
1,203,887	-				-0.5
1,203,909	+				+0.4
1,203,909	+				-0.5
1,203,909	+				-0.5
1,203,909	+				-0.1
1,203,909	+				+0.5
1,203,910	-				-0.2
1,203,910	-				-0.4
1,203,910	-				-1.1
1,203,919	+				-2.1
1,203,920	-				+0.3
1,203,974	+				+0.0
1,203,974	+				+1.3
1,203,975	-				-0.5
1,203,975	-				+0.8
1,203,995	+				-1.0
1,204,025	+				-0.7
1,204,025	+				-0.4
1,204,025	+				+0.9
1,204,025	+				+0.2
1,204,025	+				-2.0
1,204,025	+				-0.6
1,204,026	-				-0.4
1,204,084	-				-0.1
1,204,084	-				+1.3
1,204,084	-				-1.5
1,204,112	+				-1.3
1,204,112	+				-0.1
1,204,112	+				-0.6
1,204,112	+				-1.6
1,204,112	+				-0.2
1,204,112	+				-0.4
1,204,113	-				+0.5
1,204,113	-				-0.4
1,204,113	-				-0.4
1,204,113	-				-0.7
1,204,113	-				-0.6
1,204,126	+				-0.5
1,204,126	+				+0.7
1,204,126	+				-0.1
1,204,127	-				+0.4
1,204,141	+				+0.4
1,204,141	+				-0.5
1,204,141	+				-0.4
1,204,146	+				-0.2
1,204,146	+				+1.0
1,204,146	+				-1.1
1,204,146	+				+0.9
1,204,146	+				-1.2
1,204,147	-				+0.5
1,204,147	-				+1.4
1,204,155	+				-0.9
1,204,155	+				+0.2
1,204,155	+				-0.1
1,204,155	+				+0.4
1,204,156	-				+0.2
1,204,313	+		LRK54_RS05580	0.31	+0.9
1,204,313	+		LRK54_RS05580	0.31	+0.3
1,204,313	+		LRK54_RS05580	0.31	-0.1
1,204,313	+		LRK54_RS05580	0.31	+0.0
1,204,314	-		LRK54_RS05580	0.31	+1.2
1,204,314	-		LRK54_RS05580	0.31	+0.2
1,204,314	-		LRK54_RS05580	0.31	+0.2
1,204,598	-				-0.2
1,204,601	+				-0.1
1,204,602	-				-0.3
1,204,602	-				-0.2
1,204,686	+				-0.2
1,204,686	+				-0.8
1,204,686	+				-0.4
1,204,687	-				-0.7
1,204,687	-				-1.8
1,204,687	-				+0.8
1,204,687	-				+0.8
1,204,780	+				+0.8
1,204,789	+				+0.5
1,204,789	+				+0.3
1,204,789	+				-0.5
1,204,789	+				+0.9
1,204,789	+				+0.9
1,204,789	+				+0.6
1,204,790	-				+0.7
1,204,790	-				-0.2
1,204,800	-				-0.3
1,204,800	-				+0.1
1,204,800	-				+0.3
1,204,835	+				+0.2
1,204,835	+				-0.1
1,204,835	+				+0.6
1,204,835	+				+0.9
1,204,835	+				-0.1
1,204,835	+				+0.2
1,204,835	+				+0.3
1,204,835	+				+0.7
1,204,836	-				+1.1
1,204,836	-				+0.7
1,204,836	-				-1.6
1,204,836	-				-0.1
1,204,836	-				+0.7
1,204,836	-				-0.7
1,204,836	-				+0.5
1,204,836	-				-0.2
1,204,836	-				-0.9
1,204,836	-				+0.4
1,204,836	-				-0.3
1,204,857	+				+0.8
1,204,857	+				+0.7
1,204,879	+		LRK54_RS05585	0.10	+0.4
1,204,879	+		LRK54_RS05585	0.10	+0.8
1,204,879	+		LRK54_RS05585	0.10	+1.0
1,204,879	+		LRK54_RS05585	0.10	+0.2
1,204,879	+		LRK54_RS05585	0.10	-0.0
1,204,880	-		LRK54_RS05585	0.11	-0.1
1,204,880	-		LRK54_RS05585	0.11	-0.2
1,204,880	-		LRK54_RS05585	0.11	-0.1
1,204,880	-		LRK54_RS05585	0.11	+1.4
1,204,880	-		LRK54_RS05585	0.11	-0.4
1,204,908	+		LRK54_RS05585	0.13	+1.2
1,204,908	+		LRK54_RS05585	0.13	-0.3
1,204,908	+		LRK54_RS05585	0.13	+0.1
1,204,908	+		LRK54_RS05585	0.13	+0.9
1,204,908	+		LRK54_RS05585	0.13	-0.5
1,204,908	+		LRK54_RS05585	0.13	-0.1
1,204,908	+		LRK54_RS05585	0.13	+0.6
1,204,908	+		LRK54_RS05585	0.13	-0.1
1,204,908	+		LRK54_RS05585	0.13	+0.7
1,204,908	+		LRK54_RS05585	0.13	+0.2
1,204,908	+		LRK54_RS05585	0.13	-2.1
1,204,908	+		LRK54_RS05585	0.13	-0.7
1,204,908	+		LRK54_RS05585	0.13	-0.7
1,204,908	+		LRK54_RS05585	0.13	+1.0
1,204,908	+		LRK54_RS05585	0.13	-0.0
1,204,908	+		LRK54_RS05585	0.13	-1.4
1,204,908	+		LRK54_RS05585	0.13	+0.1
1,204,908	+		LRK54_RS05585	0.13	+0.0
1,204,908	+		LRK54_RS05585	0.13	+0.2
1,204,908	+		LRK54_RS05585	0.13	+0.3
1,204,908	+		LRK54_RS05585	0.13	+0.1
1,204,909	-		LRK54_RS05585	0.13	+0.0
1,204,909	-		LRK54_RS05585	0.13	-0.6
1,204,909	-		LRK54_RS05585	0.13	+1.9
1,204,909	-		LRK54_RS05585	0.13	+0.3
1,204,909	-		LRK54_RS05585	0.13	+0.2
1,204,909	-		LRK54_RS05585	0.13	+0.3
1,204,909	-		LRK54_RS05585	0.13	+0.4
1,204,909	-		LRK54_RS05585	0.13	-0.3
1,204,909	-		LRK54_RS05585	0.13	+0.9
1,204,909	-		LRK54_RS05585	0.13	+0.5
1,204,909	-		LRK54_RS05585	0.13	+0.1
1,204,909	-		LRK54_RS05585	0.13	-0.2
1,204,909	-		LRK54_RS05585	0.13	-0.0
1,204,909	-		LRK54_RS05585	0.13	+0.0
1,204,909	-		LRK54_RS05585	0.13	+0.4
1,204,909	-		LRK54_RS05585	0.13	+0.6
1,204,909	-		LRK54_RS05585	0.13	+0.5
1,204,909	-		LRK54_RS05585	0.13	+0.4
1,204,909	-		LRK54_RS05585	0.13	+0.1
1,204,909	-		LRK54_RS05585	0.13	+0.9
1,204,909	-		LRK54_RS05585	0.13	-0.2
1,204,909	-		LRK54_RS05585	0.13	-0.0
1,204,909	-		LRK54_RS05585	0.13	+1.0
1,204,909	-		LRK54_RS05585	0.13	+0.2
1,204,909	-		LRK54_RS05585	0.13	-0.1
1,204,909	-		LRK54_RS05585	0.13	+0.9
1,204,910	-		LRK54_RS05585	0.13	-1.1
1,204,936	+		LRK54_RS05585	0.16	+0.7
1,204,937	-		LRK54_RS05585	0.16	+0.3
1,205,028	+		LRK54_RS05585	0.24	-1.0
1,205,028	+		LRK54_RS05585	0.24	+0.0
1,205,028	+		LRK54_RS05585	0.24	+0.3
1,205,028	+		LRK54_RS05585	0.24	+0.0
1,205,028	+		LRK54_RS05585	0.24	+0.2
1,205,028	+		LRK54_RS05585	0.24	+1.2
1,205,028	+		LRK54_RS05585	0.24	-0.5
1,205,028	+		LRK54_RS05585	0.24	-0.5
1,205,028	+		LRK54_RS05585	0.24	+0.6
1,205,028	+		LRK54_RS05585	0.24	+1.9
1,205,028	+		LRK54_RS05585	0.24	+0.4
1,205,028	+		LRK54_RS05585	0.24	+0.9
1,205,028	+		LRK54_RS05585	0.24	+0.4
1,205,028	+		LRK54_RS05585	0.24	+1.2
1,205,028	+		LRK54_RS05585	0.24	+0.3
1,205,028	+		LRK54_RS05585	0.24	+0.2
1,205,028	+		LRK54_RS05585	0.24	+0.5
1,205,028	+		LRK54_RS05585	0.24	+1.3
1,205,028	+		LRK54_RS05585	0.24	+0.9
1,205,028	+		LRK54_RS05585	0.24	+0.8
1,205,028	+		LRK54_RS05585	0.24	+0.9
1,205,028	+		LRK54_RS05585	0.24	-0.8
1,205,028	+		LRK54_RS05585	0.24	+0.4
1,205,028	+		LRK54_RS05585	0.24	+0.5
1,205,028	+		LRK54_RS05585	0.24	+0.7
1,205,028	+		LRK54_RS05585	0.24	+0.3
1,205,028	+		LRK54_RS05585	0.24	+0.0
1,205,028	+		LRK54_RS05585	0.24	+1.6
1,205,028	+		LRK54_RS05585	0.24	+1.4
1,205,028	+		LRK54_RS05585	0.24	+1.8
1,205,029	-		LRK54_RS05585	0.24	+0.1
1,205,029	-		LRK54_RS05585	0.24	+0.3
1,205,029	-		LRK54_RS05585	0.24	-0.4
1,205,029	-		LRK54_RS05585	0.24	-0.1
1,205,029	-		LRK54_RS05585	0.24	+1.2
1,205,029	-		LRK54_RS05585	0.24	+0.3
1,205,029	-		LRK54_RS05585	0.24	+0.7
1,205,029	-		LRK54_RS05585	0.24	-0.1
1,205,029	-		LRK54_RS05585	0.24	+0.8
1,205,029	-		LRK54_RS05585	0.24	+0.6
1,205,029	-		LRK54_RS05585	0.24	-0.5
1,205,029	-		LRK54_RS05585	0.24	+0.3
1,205,029	-		LRK54_RS05585	0.24	+0.3
1,205,029	-		LRK54_RS05585	0.24	+0.8
1,205,029	-		LRK54_RS05585	0.24	-0.3
1,205,029	-		LRK54_RS05585	0.24	+0.2
1,205,029	-		LRK54_RS05585	0.24	-0.8
1,205,029	-		LRK54_RS05585	0.24	-0.0
1,205,029	-		LRK54_RS05585	0.24	+0.3
1,205,029	-		LRK54_RS05585	0.24	-0.1
1,205,029	-		LRK54_RS05585	0.24	+2.2
1,205,029	-		LRK54_RS05585	0.24	+1.0
1,205,029	-		LRK54_RS05585	0.24	-0.3
1,205,029	-		LRK54_RS05585	0.24	-0.2
1,205,029	-		LRK54_RS05585	0.24	+1.0
1,205,029	-		LRK54_RS05585	0.24	+1.4
1,205,029	-		LRK54_RS05585	0.24	+1.3
1,205,029	-		LRK54_RS05585	0.24	-0.0
1,205,029	-		LRK54_RS05585	0.24	-0.0
1,205,029	-		LRK54_RS05585	0.24	+0.2
1,205,029	-		LRK54_RS05585	0.24	+0.5
1,205,029	-		LRK54_RS05585	0.24	+0.9
1,205,029	-		LRK54_RS05585	0.24	+0.3
1,205,029	-		LRK54_RS05585	0.24	-0.2
1,205,029	-		LRK54_RS05585	0.24	+0.4
1,205,029	-		LRK54_RS05585	0.24	-0.5
1,205,029	-		LRK54_RS05585	0.24	+0.4
1,205,029	-		LRK54_RS05585	0.24	-0.5
1,205,029	-		LRK54_RS05585	0.24	-0.6
1,205,029	-		LRK54_RS05585	0.24	-0.3
1,205,029	-		LRK54_RS05585	0.24	+0.6
1,205,096	+		LRK54_RS05585	0.30	+0.2
1,205,096	+		LRK54_RS05585	0.30	+0.2
1,205,096	+		LRK54_RS05585	0.30	+0.1
1,205,096	+		LRK54_RS05585	0.30	-0.3
1,205,096	+		LRK54_RS05585	0.30	-0.5
1,205,097	-		LRK54_RS05585	0.30	-0.0
1,205,097	-		LRK54_RS05585	0.30	+0.6
1,205,097	-		LRK54_RS05585	0.30	-0.4
1,205,097	-		LRK54_RS05585	0.30	+1.5
1,205,169	+		LRK54_RS05585	0.37	+0.1
1,205,169	+		LRK54_RS05585	0.37	+0.9
1,205,169	+		LRK54_RS05585	0.37	+0.3
1,205,169	+		LRK54_RS05585	0.37	-0.6
1,205,169	+		LRK54_RS05585	0.37	+1.0
1,205,169	+		LRK54_RS05585	0.37	+0.4
1,205,169	+		LRK54_RS05585	0.37	-0.1
1,205,169	+		LRK54_RS05585	0.37	+0.2
1,205,170	-		LRK54_RS05585	0.37	-1.4
1,205,170	-		LRK54_RS05585	0.37	+0.1
1,205,170	-		LRK54_RS05585	0.37	+0.3
1,205,170	-		LRK54_RS05585	0.37	+1.0
1,205,170	-		LRK54_RS05585	0.37	+0.1
1,205,269	+		LRK54_RS05585	0.46	-0.2
1,205,269	+		LRK54_RS05585	0.46	+2.9
1,205,269	+		LRK54_RS05585	0.46	+0.4
1,205,269	+		LRK54_RS05585	0.46	+0.0
1,205,269	+		LRK54_RS05585	0.46	+0.2
1,205,269	+		LRK54_RS05585	0.46	+0.3
1,205,269	+		LRK54_RS05585	0.46	+1.5
1,205,270	-		LRK54_RS05585	0.46	+0.7
1,205,319	+		LRK54_RS05585	0.50	-0.8
1,205,319	+		LRK54_RS05585	0.50	+0.9
1,205,413	-		LRK54_RS05585	0.59	-0.4
1,205,430	+		LRK54_RS05585	0.60	+0.7
1,205,430	+		LRK54_RS05585	0.60	+0.6
1,205,431	-		LRK54_RS05585	0.61	+0.4
1,205,431	-		LRK54_RS05585	0.61	-0.0
1,205,431	-		LRK54_RS05585	0.61	+0.1
1,205,431	-		LRK54_RS05585	0.61	-1.5
1,205,431	-		LRK54_RS05585	0.61	-0.5
1,205,431	-		LRK54_RS05585	0.61	+0.5
1,205,553	+		LRK54_RS05585	0.72	+0.3
1,205,554	-		LRK54_RS05585	0.72	+0.2
1,205,554	-		LRK54_RS05585	0.72	-0.4
1,205,610	+		LRK54_RS05585	0.77	-0.6
1,205,610	+		LRK54_RS05585	0.77	-0.4
1,205,610	+		LRK54_RS05585	0.77	+0.4
1,205,610	+		LRK54_RS05585	0.77	-0.4
1,205,610	+		LRK54_RS05585	0.77	+0.4
1,205,610	+		LRK54_RS05585	0.77	+0.1
1,205,610	+		LRK54_RS05585	0.77	-0.3
1,205,610	+		LRK54_RS05585	0.77	-0.0
1,205,610	+		LRK54_RS05585	0.77	+0.8
1,205,610	+		LRK54_RS05585	0.77	+0.2
1,205,610	+		LRK54_RS05585	0.77	+0.3
1,205,611	-		LRK54_RS05585	0.77	+0.5
1,205,611	-		LRK54_RS05585	0.77	+2.0
1,205,611	-		LRK54_RS05585	0.77	+0.3
1,205,611	-		LRK54_RS05585	0.77	-0.1
1,205,611	-		LRK54_RS05585	0.77	+0.6
1,205,611	-		LRK54_RS05585	0.77	+2.2
1,205,611	-		LRK54_RS05585	0.77	+0.2
1,205,611	-		LRK54_RS05585	0.77	+0.5
1,205,611	-		LRK54_RS05585	0.77	-0.1
1,205,611	-		LRK54_RS05585	0.77	+0.1
1,205,611	-		LRK54_RS05585	0.77	-0.1
1,205,611	-		LRK54_RS05585	0.77	+0.5
1,205,611	-		LRK54_RS05585	0.77	+0.9
1,205,611	-		LRK54_RS05585	0.77	+0.2
1,205,611	-		LRK54_RS05585	0.77	+0.4
1,205,611	-		LRK54_RS05585	0.77	+0.3
1,205,625	+		LRK54_RS05585	0.78	-1.5
1,205,625	+		LRK54_RS05585	0.78	+1.4
1,205,625	+		LRK54_RS05585	0.78	+1.1
1,205,625	+		LRK54_RS05585	0.78	+0.8
1,205,625	+		LRK54_RS05585	0.78	+2.4
1,205,625	+		LRK54_RS05585	0.78	-0.0
1,205,625	+		LRK54_RS05585	0.78	-0.4
1,205,625	+		LRK54_RS05585	0.78	+0.3
1,205,625	+		LRK54_RS05585	0.78	-0.3
1,205,625	+		LRK54_RS05585	0.78	+0.7
1,205,625	+		LRK54_RS05585	0.78	+0.4
1,205,625	+		LRK54_RS05585	0.78	-0.3
1,205,625	+		LRK54_RS05585	0.78	+0.3
1,205,625	+		LRK54_RS05585	0.78	+0.5
1,205,625	+		LRK54_RS05585	0.78	-0.0
1,205,625	+		LRK54_RS05585	0.78	-0.3
1,205,626	-		LRK54_RS05585	0.78	+0.0
1,205,626	-		LRK54_RS05585	0.78	-1.3
1,205,626	-		LRK54_RS05585	0.78	+0.4
1,205,626	-		LRK54_RS05585	0.78	-1.1
1,205,626	-		LRK54_RS05585	0.78	-0.5
1,205,626	-		LRK54_RS05585	0.78	+0.5
1,205,626	-		LRK54_RS05585	0.78	+0.5
1,205,626	-		LRK54_RS05585	0.78	+0.1
1,205,626	-		LRK54_RS05585	0.78	+0.6
1,205,626	-		LRK54_RS05585	0.78	-1.1
1,205,626	-		LRK54_RS05585	0.78	+0.4
1,205,626	-		LRK54_RS05585	0.78	-0.3
1,205,629	+		LRK54_RS05585	0.79	+0.4
1,205,629	+		LRK54_RS05585	0.79	+0.8
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