Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02070 and ABID97_RS02075 are separated by 9 nucleotides ABID97_RS02075 and ABID97_RS02080 are separated by 485 nucleotides ABID97_RS02080 and ABID97_RS02085 are separated by 79 nucleotides ABID97_RS02085 and ABID97_RS02090 are separated by 86 nucleotides
ABID97_RS02070: ABID97_RS02070 - DUF2007 domain-containing protein, at 416,808 to 417,113
_RS02070
ABID97_RS02075: ABID97_RS02075 - DUF3717 domain-containing protein, at 417,123 to 417,587
_RS02075
ABID97_RS02080: ABID97_RS02080 - TerC family protein, at 418,073 to 418,819
_RS02080
ABID97_RS02085: ABID97_RS02085 - hypothetical protein, at 418,899 to 419,363
_RS02085
ABID97_RS02090: ABID97_RS02090 - phage holin family protein, at 419,450 to 419,803
_RS02090
Position (kb) 418
419 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 417.388 kb on + strand, within ABID97_RS02075 at 417.388 kb on + strand, within ABID97_RS02075 at 417.472 kb on + strand, within ABID97_RS02075 at 417.473 kb on - strand, within ABID97_RS02075 at 417.473 kb on - strand, within ABID97_RS02075 at 417.473 kb on - strand, within ABID97_RS02075 at 417.473 kb on - strand, within ABID97_RS02075 at 417.619 kb on - strand at 417.619 kb on - strand at 417.619 kb on - strand at 417.619 kb on - strand at 417.619 kb on - strand at 417.652 kb on + strand at 417.783 kb on + strand at 417.784 kb on - strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.009 kb on - strand at 418.072 kb on + strand at 418.072 kb on + strand at 418.072 kb on + strand at 418.072 kb on + strand at 418.072 kb on + strand at 418.072 kb on + strand at 418.072 kb on + strand at 418.073 kb on - strand at 418.818 kb on - strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.877 kb on + strand at 418.878 kb on - strand at 418.878 kb on - strand at 418.878 kb on - strand at 418.878 kb on - strand at 418.881 kb on + strand at 418.881 kb on + strand at 418.881 kb on + strand at 418.882 kb on - strand at 418.882 kb on - strand at 418.918 kb on - strand at 418.918 kb on - strand at 419.361 kb on + strand at 419.361 kb on + strand at 419.362 kb on - strand at 419.362 kb on - strand at 419.510 kb on + strand, within ABID97_RS02090 at 419.744 kb on + strand, within ABID97_RS02090 at 419.744 kb on + strand, within ABID97_RS02090 at 419.744 kb on + strand, within ABID97_RS02090 at 419.744 kb on + strand, within ABID97_RS02090 at 419.745 kb on - strand, within ABID97_RS02090 at 419.745 kb on - strand, within ABID97_RS02090
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 417,388 + ABID97_RS02075 0.57 -0.0 417,388 + ABID97_RS02075 0.57 +0.4 417,472 + ABID97_RS02075 0.75 +0.2 417,473 - ABID97_RS02075 0.75 +0.4 417,473 - ABID97_RS02075 0.75 -0.0 417,473 - ABID97_RS02075 0.75 +0.6 417,473 - ABID97_RS02075 0.75 -0.0 417,619 - +0.1 417,619 - -0.3 417,619 - -0.5 417,619 - -0.2 417,619 - -0.5 417,652 + +0.2 417,783 + -0.7 417,784 - -0.5 418,008 + -0.3 418,008 + -0.0 418,008 + -0.5 418,008 + -0.1 418,008 + +0.0 418,009 - +0.1 418,072 + +1.6 418,072 + -0.2 418,072 + -0.4 418,072 + +0.1 418,072 + +1.1 418,072 + -0.6 418,072 + +0.1 418,073 - -1.3 418,818 - +1.2 418,877 + -0.2 418,877 + +1.8 418,877 + -0.5 418,877 + +0.7 418,877 + +0.3 418,877 + -0.4 418,877 + +0.6 418,877 + +0.4 418,877 + -0.1 418,878 - -0.8 418,878 - -0.5 418,878 - -0.0 418,878 - -0.3 418,881 + +3.8 418,881 + +0.0 418,881 + -0.0 418,882 - -0.6 418,882 - +0.1 418,918 - -0.4 418,918 - -0.0 419,361 + -0.3 419,361 + -0.2 419,362 - +1.2 419,362 - +0.3 419,510 + ABID97_RS02090 0.17 +0.7 419,744 + ABID97_RS02090 0.83 -1.4 419,744 + ABID97_RS02090 0.83 +0.3 419,744 + ABID97_RS02090 0.83 -0.2 419,744 + ABID97_RS02090 0.83 -0.3 419,745 - ABID97_RS02090 0.83 -0.2 419,745 - ABID97_RS02090 0.83 -0.1
Or see this region's nucleotide sequence