Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07160

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,598,973	-		PFLU_RS07155	0.45	+1.9
1,599,002	+		PFLU_RS07155	0.48	+0.2
1,599,002	+		PFLU_RS07155	0.48	+0.5
1,599,003	-		PFLU_RS07155	0.48	-0.5
1,599,086	+		PFLU_RS07155	0.54	+0.9
1,599,086	+		PFLU_RS07155	0.54	+1.5
1,599,086	+		PFLU_RS07155	0.54	+0.7
1,599,086	+		PFLU_RS07155	0.54	-0.5
1,599,086	+		PFLU_RS07155	0.54	+0.1
1,599,086	+		PFLU_RS07155	0.54	-0.6
1,599,087	-		PFLU_RS07155	0.54	+1.1
1,599,087	-		PFLU_RS07155	0.54	-0.8
1,599,299	+		PFLU_RS07155	0.71	-0.1
1,599,299	+		PFLU_RS07155	0.71	+0.4
1,599,299	+		PFLU_RS07155	0.71	-0.6
1,599,299	+		PFLU_RS07155	0.71	+0.8
1,599,299	+		PFLU_RS07155	0.71	+0.3
1,599,300	-		PFLU_RS07155	0.71	+0.9
1,599,300	-		PFLU_RS07155	0.71	+1.1
1,599,300	-		PFLU_RS07155	0.71	+0.1
1,599,428	+		PFLU_RS07155	0.81	+0.3
1,599,429	-		PFLU_RS07155	0.81	+0.9
1,599,493	-		PFLU_RS07155	0.86	+0.3
1,599,521	+		PFLU_RS07155	0.88	-1.1
1,599,521	+		PFLU_RS07155	0.88	-2.9
1,599,521	+		PFLU_RS07155	0.88	-0.3
1,599,521	+		PFLU_RS07155	0.88	-0.9
1,599,521	+		PFLU_RS07155	0.88	-0.7
1,599,521	+		PFLU_RS07155	0.88	-0.2
1,599,521	+		PFLU_RS07155	0.88	+0.1
1,599,521	+		PFLU_RS07155	0.88	-0.9
1,599,521	+		PFLU_RS07155	0.88	+0.5
1,599,521	+		PFLU_RS07155	0.88	-1.5
1,599,522	-		PFLU_RS07155	0.88	+0.3
1,599,522	-		PFLU_RS07155	0.88	+0.4
1,599,522	-		PFLU_RS07155	0.88	-0.1
1,599,522	-		PFLU_RS07155	0.88	+0.7
1,599,522	-		PFLU_RS07155	0.88	+0.4
1,599,522	-		PFLU_RS07155	0.88	-2.7
1,599,522	-		PFLU_RS07155	0.88	-0.2
1,599,522	-		PFLU_RS07155	0.88	+0.5
1,599,522	-		PFLU_RS07155	0.88	-0.1
1,599,522	-		PFLU_RS07155	0.88	-0.4
1,599,522	-		PFLU_RS07155	0.88	+1.4
1,599,549	+				-0.0
1,599,686	+				-1.5
1,599,687	-				+0.1
1,599,687	-				+1.1
1,599,687	-				-1.1
1,599,687	-				+0.4
1,599,687	-				+0.7
1,599,695	-				+2.8
1,599,703	+				-0.1
1,599,703	+				+0.6
1,599,703	+				+0.9
1,599,704	-				+2.0
1,599,704	-				+0.9
1,599,704	-				+1.4
1,599,704	-				+2.1
1,599,766	+				-0.8
1,599,766	+				+0.9
1,599,766	+				+0.7
1,599,766	+				+0.5
1,599,766	+				-0.6
1,599,766	+				+0.2
1,599,766	+				+0.0
1,599,766	+				+0.7
1,599,766	+				-0.7
1,599,766	+				+1.0
1,599,767	-				+1.7
1,599,767	-				+0.8
1,599,767	-				-0.3
1,599,787	+				-0.5
1,599,788	-				-1.9
1,599,788	-				+0.7
1,599,806	+				+0.2
1,599,807	-				-0.1
1,599,861	+				-2.0
1,599,906	-				-1.8
1,599,906	-				-2.2
1,599,906	-				-1.8
1,600,047	-		PFLU_RS07160	0.20	-0.3
1,600,205	+		PFLU_RS07160	0.43	-1.7
1,600,205	+		PFLU_RS07160	0.43	-1.2
1,600,205	+		PFLU_RS07160	0.43	-2.4
1,600,206	-		PFLU_RS07160	0.43	-2.8
1,600,311	+		PFLU_RS07160	0.59	-1.7
1,600,311	+		PFLU_RS07160	0.59	-1.2
1,600,311	+		PFLU_RS07160	0.59	-0.7
1,600,311	+		PFLU_RS07160	0.59	-2.4
1,600,311	+		PFLU_RS07160	0.59	-2.7
1,600,311	+		PFLU_RS07160	0.59	-2.4
1,600,311	+		PFLU_RS07160	0.59	-3.2
1,600,311	+		PFLU_RS07160	0.59	-0.9
1,600,311	+		PFLU_RS07160	0.59	-2.5
1,600,311	+		PFLU_RS07160	0.59	-1.9
1,600,311	+		PFLU_RS07160	0.59	-2.3
1,600,311	+		PFLU_RS07160	0.59	-0.3
1,600,311	+		PFLU_RS07160	0.59	-1.5
1,600,312	-		PFLU_RS07160	0.59	-2.2
1,600,312	-		PFLU_RS07160	0.59	-3.5
1,600,312	-		PFLU_RS07160	0.59	-1.7
1,600,312	-		PFLU_RS07160	0.59	-3.2
1,600,312	-		PFLU_RS07160	0.59	-1.7
1,600,312	-		PFLU_RS07160	0.59	-1.2
1,600,312	-		PFLU_RS07160	0.59	-1.2
1,600,312	-		PFLU_RS07160	0.59	-3.0
1,600,312	-		PFLU_RS07160	0.59	-2.1
1,600,312	-		PFLU_RS07160	0.59	-0.7
1,600,312	-		PFLU_RS07160	0.59	-3.3
1,600,312	-		PFLU_RS07160	0.59	-0.5
1,600,312	-		PFLU_RS07160	0.59	-2.3
1,600,312	-		PFLU_RS07160	0.59	-1.7
1,600,312	-		PFLU_RS07160	0.59	-1.2
1,600,312	-		PFLU_RS07160	0.59	-1.9
1,600,312	-		PFLU_RS07160	0.59	-2.7
1,600,312	-		PFLU_RS07160	0.59	-1.2
1,600,312	-		PFLU_RS07160	0.59	+0.9
1,600,312	-		PFLU_RS07160	0.59	-3.8
1,600,312	-		PFLU_RS07160	0.59	-3.3
1,600,312	-		PFLU_RS07160	0.59	-2.0
1,600,312	-		PFLU_RS07160	0.59	-2.4
1,600,313	+		PFLU_RS07160	0.59	-1.9
1,600,313	+		PFLU_RS07160	0.59	-3.6
1,600,313	+		PFLU_RS07160	0.59	-2.0
1,600,313	+		PFLU_RS07160	0.59	-1.9
1,600,313	+		PFLU_RS07160	0.59	-1.8
1,600,313	+		PFLU_RS07160	0.59	-3.1
1,600,313	+		PFLU_RS07160	0.59	-1.8
1,600,313	+		PFLU_RS07160	0.59	-3.7
1,600,313	+		PFLU_RS07160	0.59	-2.8
1,600,313	+		PFLU_RS07160	0.59	-2.7
1,600,313	+		PFLU_RS07160	0.59	-0.5
1,600,314	-		PFLU_RS07160	0.60	-3.1
1,600,314	-		PFLU_RS07160	0.60	-0.1
1,600,314	-		PFLU_RS07160	0.60	-1.5
1,600,314	-		PFLU_RS07160	0.60	-0.6
1,600,314	-		PFLU_RS07160	0.60	-2.3
1,600,314	-		PFLU_RS07160	0.60	-0.1
1,600,314	-		PFLU_RS07160	0.60	-1.9
1,600,314	-		PFLU_RS07160	0.60	-3.5
1,600,314	-		PFLU_RS07160	0.60	-2.1
1,600,314	-		PFLU_RS07160	0.60	-0.7
1,600,314	-		PFLU_RS07160	0.60	-1.2
1,600,314	-		PFLU_RS07160	0.60	-0.9
1,600,314	-		PFLU_RS07160	0.60	-2.0
1,600,314	-		PFLU_RS07160	0.60	-1.8
1,600,314	-		PFLU_RS07160	0.60	-3.1
1,600,314	-		PFLU_RS07160	0.60	-2.4
1,600,314	-		PFLU_RS07160	0.60	-1.5
1,600,423	+		PFLU_RS07160	0.76	-2.3
1,600,423	+		PFLU_RS07160	0.76	-2.2
1,600,447	-		PFLU_RS07160	0.79	-0.8
1,600,490	+		PFLU_RS07160	0.86	-2.2
1,600,490	+		PFLU_RS07160	0.86	-2.2
1,600,490	+		PFLU_RS07160	0.86	-3.5
1,600,490	+		PFLU_RS07160	0.86	-1.6
1,600,490	+		PFLU_RS07160	0.86	-2.4
1,600,490	+		PFLU_RS07160	0.86	-3.6
1,600,490	+		PFLU_RS07160	0.86	-3.0
1,600,491	-		PFLU_RS07160	0.86	-2.2
1,600,491	-		PFLU_RS07160	0.86	-3.4
1,600,491	-		PFLU_RS07160	0.86	-2.9
1,600,491	-		PFLU_RS07160	0.86	-2.4
1,600,491	-		PFLU_RS07160	0.86	-1.8
1,600,491	-		PFLU_RS07160	0.86	+0.5
1,600,507	+		PFLU_RS07160	0.88	-2.5
1,600,507	+		PFLU_RS07160	0.88	-1.2
1,600,507	+		PFLU_RS07160	0.88	-1.4
1,600,507	+		PFLU_RS07160	0.88	-1.1
1,600,507	+		PFLU_RS07160	0.88	-1.9
1,600,507	+		PFLU_RS07160	0.88	-2.9
1,600,508	-		PFLU_RS07160	0.88	-2.1
1,600,508	-		PFLU_RS07160	0.88	+0.7
1,600,508	-		PFLU_RS07160	0.88	-2.2
1,600,559	+				-0.3
1,600,560	-				-2.3
1,600,583	+				-2.4
1,600,583	+				-1.1
1,600,584	-				+0.5
1,600,584	-				-3.2
1,600,584	-				-3.1
1,600,584	-				-3.2
1,600,584	-				-2.7
1,600,668	+				-2.6
1,600,668	+				-3.3
1,600,669	-				-1.9
1,600,702	-				-2.7
1,600,709	+				-1.6
1,600,763	+		PFLU_RS07165	0.13	-0.5
1,600,785	+		PFLU_RS07165	0.15	-1.0
1,600,785	+		PFLU_RS07165	0.15	+0.5
1,600,785	+		PFLU_RS07165	0.15	-1.7
1,600,785	+		PFLU_RS07165	0.15	-3.0
1,600,786	-		PFLU_RS07165	0.15	-3.6
1,600,786	-		PFLU_RS07165	0.15	-3.5
1,600,786	-		PFLU_RS07165	0.15	-1.7
1,600,786	-		PFLU_RS07165	0.15	-1.8
1,600,786	-		PFLU_RS07165	0.15	-3.8
1,600,786	-		PFLU_RS07165	0.15	-2.3
1,600,786	-		PFLU_RS07165	0.15	-1.3
1,600,786	-		PFLU_RS07165	0.15	-3.5
1,600,786	-		PFLU_RS07165	0.15	-2.5
1,600,809	+		PFLU_RS07165	0.17	-0.9
1,600,810	-		PFLU_RS07165	0.17	-2.4
1,600,827	-		PFLU_RS07165	0.18	-2.6
1,600,830	+		PFLU_RS07165	0.18	-3.9
1,600,830	+		PFLU_RS07165	0.18	-1.5
1,600,830	+		PFLU_RS07165	0.18	-2.2
1,600,830	+		PFLU_RS07165	0.18	-1.7
1,600,830	+		PFLU_RS07165	0.18	-3.0
1,600,830	+		PFLU_RS07165	0.18	-3.4
1,600,830	+		PFLU_RS07165	0.18	-0.8
1,600,830	+		PFLU_RS07165	0.18	-2.7
1,600,830	+		PFLU_RS07165	0.18	-1.9
1,600,830	+		PFLU_RS07165	0.18	-0.8
1,600,830	+		PFLU_RS07165	0.18	-4.0
1,600,830	+		PFLU_RS07165	0.18	-3.3
1,600,830	+		PFLU_RS07165	0.18	-2.5
1,600,830	+		PFLU_RS07165	0.18	-2.3
1,600,831	-		PFLU_RS07165	0.18	-0.8
1,600,831	-		PFLU_RS07165	0.18	-1.9
1,600,831	-		PFLU_RS07165	0.18	-1.7
1,600,831	-		PFLU_RS07165	0.18	-2.7
1,600,831	-		PFLU_RS07165	0.18	-1.5
1,600,831	-		PFLU_RS07165	0.18	-1.5
1,600,831	-		PFLU_RS07165	0.18	-4.0
1,600,831	-		PFLU_RS07165	0.18	-2.9
1,600,831	-		PFLU_RS07165	0.18	-2.7
1,600,831	-		PFLU_RS07165	0.18	-2.1
1,600,831	-		PFLU_RS07165	0.18	-3.0
1,600,833	+		PFLU_RS07165	0.18	-3.0
1,600,833	+		PFLU_RS07165	0.18	-1.9
1,600,833	+		PFLU_RS07165	0.18	-0.7
1,600,833	+		PFLU_RS07165	0.18	-2.4
1,600,833	+		PFLU_RS07165	0.18	-3.1
1,600,833	+		PFLU_RS07165	0.18	-0.9
1,600,834	-		PFLU_RS07165	0.18	-2.2
1,600,902	-		PFLU_RS07165	0.23	-3.9
1,600,941	+		PFLU_RS07165	0.26	-1.1
1,600,941	+		PFLU_RS07165	0.26	-3.7
1,600,941	+		PFLU_RS07165	0.26	-3.1
1,600,941	+		PFLU_RS07165	0.26	-0.9
1,600,942	-		PFLU_RS07165	0.26	-2.4
1,600,942	-		PFLU_RS07165	0.26	-2.5
1,600,942	-		PFLU_RS07165	0.26	-0.9
1,600,942	-		PFLU_RS07165	0.26	-3.2
1,600,942	-		PFLU_RS07165	0.26	-1.3
1,600,942	-		PFLU_RS07165	0.26	-2.9
1,600,942	-		PFLU_RS07165	0.26	-2.1
1,600,953	+		PFLU_RS07165	0.27	-1.4
1,600,953	+		PFLU_RS07165	0.27	-1.9
1,600,953	+		PFLU_RS07165	0.27	-2.7
1,600,953	+		PFLU_RS07165	0.27	-1.6
1,600,953	+		PFLU_RS07165	0.27	-2.8
1,600,953	+		PFLU_RS07165	0.27	-2.5
1,600,953	+		PFLU_RS07165	0.27	-0.9
1,600,953	+		PFLU_RS07165	0.27	-3.1
1,600,953	+		PFLU_RS07165	0.27	-2.8
1,600,953	+		PFLU_RS07165	0.27	-1.9
1,600,954	-		PFLU_RS07165	0.27	-0.8
1,600,954	-		PFLU_RS07165	0.27	-3.7
1,600,954	-		PFLU_RS07165	0.27	-1.7
1,600,954	-		PFLU_RS07165	0.27	-3.2
1,600,954	-		PFLU_RS07165	0.27	-3.1
1,600,954	-		PFLU_RS07165	0.27	-4.6
1,600,954	-		PFLU_RS07165	0.27	-2.5
1,600,954	-		PFLU_RS07165	0.27	-2.2
1,600,954	-		PFLU_RS07165	0.27	-1.7
1,600,954	-		PFLU_RS07165	0.27	-1.1
1,600,954	-		PFLU_RS07165	0.27	-2.4
1,601,029	+		PFLU_RS07165	0.33	-2.7
1,601,029	+		PFLU_RS07165	0.33	-3.6
1,601,029	+		PFLU_RS07165	0.33	-2.4
1,601,029	+		PFLU_RS07165	0.33	-3.1
1,601,029	+		PFLU_RS07165	0.33	-3.1
1,601,030	-		PFLU_RS07165	0.33	-2.5
1,601,030	-		PFLU_RS07165	0.33	-3.5
1,601,030	-		PFLU_RS07165	0.33	-2.4
1,601,128	+		PFLU_RS07165	0.40	-1.7
1,601,321	+		PFLU_RS07165	0.54	-3.2
1,601,321	+		PFLU_RS07165	0.54	-3.1
1,601,349	-		PFLU_RS07165	0.56	-1.9
1,601,536	+		PFLU_RS07165	0.69	-2.4
1,601,537	-		PFLU_RS07165	0.69	-3.8