Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12100

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
2,995,001	-				-0.3
2,995,001	-				+0.5
2,995,013	+				-0.6
2,995,095	+				-0.7
2,995,104	+				+1.5
2,995,112	+				+0.0
2,995,123	+				-0.1
2,995,124	-				+0.6
2,995,170	-				+0.4
2,995,214	-				+0.3
2,995,230	+				-0.1
2,995,231	-				-0.3
2,995,234	+				+0.0
2,995,267	+				+0.7
2,995,280	+				+0.2
2,995,281	-				+0.1
2,995,286	-				-0.4
2,995,328	-				+0.3
2,995,410	-		CA265_RS12095	0.18	+0.3
2,995,414	+		CA265_RS12095	0.18	-0.1
2,995,414	+		CA265_RS12095	0.18	-0.9
2,995,438	-		CA265_RS12095	0.22	-0.0
2,995,466	+		CA265_RS12095	0.27	+0.5
2,995,466	+		CA265_RS12095	0.27	+0.1
2,995,475	+		CA265_RS12095	0.29	+0.6
2,995,475	+		CA265_RS12095	0.29	-0.6
2,995,476	-		CA265_RS12095	0.29	-0.3
2,995,515	+		CA265_RS12095	0.36	+0.0
2,995,534	+		CA265_RS12095	0.39	+0.9
2,995,534	+		CA265_RS12095	0.39	+0.0
2,995,535	-		CA265_RS12095	0.39	+0.5
2,995,541	-		CA265_RS12095	0.40	-0.2
2,995,543	-		CA265_RS12095	0.41	+0.2
2,995,543	-		CA265_RS12095	0.41	-1.0
2,995,547	+		CA265_RS12095	0.41	+0.4
2,995,585	-		CA265_RS12095	0.48	+0.5
2,995,600	+		CA265_RS12095	0.51	-0.6
2,995,604	+		CA265_RS12095	0.51	-1.5
2,995,605	-		CA265_RS12095	0.51	-0.0
2,995,684	-		CA265_RS12095	0.65	+0.1
2,995,684	-		CA265_RS12095	0.65	+0.3
2,995,685	+		CA265_RS12095	0.65	-0.4
2,995,686	-		CA265_RS12095	0.65	-0.3
2,995,754	+		CA265_RS12095	0.77	-1.1
2,995,755	-		CA265_RS12095	0.77	-1.6
2,995,755	-		CA265_RS12095	0.77	+0.7
2,995,755	-		CA265_RS12095	0.77	+0.7
2,995,759	+		CA265_RS12095	0.78	+0.7
2,995,759	+		CA265_RS12095	0.78	-0.9
2,995,788	-		CA265_RS12095	0.83	+0.7
2,995,854	-				+0.5
2,995,878	+				-0.3
2,995,899	-				-0.8
2,995,920	-				+0.4
2,995,968	+				-1.0
2,995,976	+				-0.9
2,995,977	-				-0.3
2,995,977	-				-0.1
2,995,977	-				+0.4
2,995,984	-				-0.9
2,995,986	-				-0.3
2,996,033	+				+1.2
2,996,033	+				-0.9
2,996,033	+				-0.6
2,996,084	+				-1.7
2,996,150	+		CA265_RS12100	0.14	-1.2
2,996,247	+		CA265_RS12100	0.23	-1.8
2,996,283	+		CA265_RS12100	0.26	-1.1
2,996,328	+		CA265_RS12100	0.30	-1.0
2,996,360	+		CA265_RS12100	0.33	-1.2
2,996,361	-		CA265_RS12100	0.33	-0.3
2,996,381	+		CA265_RS12100	0.35	-1.5
2,996,400	-		CA265_RS12100	0.37	+2.0
2,996,429	+		CA265_RS12100	0.40	-1.1
2,996,429	+		CA265_RS12100	0.40	-1.3
2,996,429	+		CA265_RS12100	0.40	-1.5
2,996,435	-		CA265_RS12100	0.40	-0.1
2,996,443	-		CA265_RS12100	0.41	+1.0
2,996,462	+		CA265_RS12100	0.43	-2.3
2,996,469	-		CA265_RS12100	0.43	+0.6
2,996,471	+		CA265_RS12100	0.43	-0.6
2,996,504	-		CA265_RS12100	0.46	+0.8
2,996,504	-		CA265_RS12100	0.46	+0.4
2,996,504	-		CA265_RS12100	0.46	-3.0
2,996,534	+		CA265_RS12100	0.49	-2.5
2,996,564	-		CA265_RS12100	0.52	-0.2
2,996,681	+		CA265_RS12100	0.62	-1.0
2,996,706	+		CA265_RS12100	0.65	-2.9
2,996,780	+		CA265_RS12100	0.71	-2.0
2,996,805	+		CA265_RS12100	0.74	-2.6
2,996,807	+		CA265_RS12100	0.74	-2.2
2,996,807	+		CA265_RS12100	0.74	-1.9
2,996,814	+		CA265_RS12100	0.75	-1.9
2,996,826	-		CA265_RS12100	0.76	+0.2
2,996,833	-		CA265_RS12100	0.76	-1.2
2,996,843	+		CA265_RS12100	0.77	-1.0
2,996,899	-		CA265_RS12100	0.82	-0.4
2,996,907	+		CA265_RS12100	0.83	-2.0
2,996,907	+		CA265_RS12100	0.83	-2.3
2,996,907	+		CA265_RS12100	0.83	-2.2
2,996,908	-		CA265_RS12100	0.83	-0.0
2,996,910	+		CA265_RS12100	0.83	-2.1
2,996,971	-		CA265_RS12100	0.89	-0.2
2,996,989	+				-4.0
2,996,990	-				+1.0
2,997,010	-				+0.3
2,997,012	-				-0.7
2,997,042	-				-0.2
2,997,042	-				-0.2
2,997,096	-				+0.3
2,997,125	-				-1.2
2,997,130	-				+0.4
2,997,135	-				-0.8
2,997,150	+				-0.3
2,997,190	+				-1.8
2,997,190	+				+0.4
2,997,338	+				+0.3
2,997,339	-				-0.9
2,997,363	+				-0.4
2,997,363	+				-1.2
2,997,364	-				-1.3
2,997,413	-				-0.5
2,997,466	+				+0.3
2,997,516	+				-1.4
2,997,589	+				+0.3
2,997,590	-				+0.7
2,997,766	+		CA265_RS12105	0.14	-1.7
2,997,774	-		CA265_RS12105	0.14	+0.7
2,997,824	+		CA265_RS12105	0.16	-0.6
2,997,869	+		CA265_RS12105	0.17	+0.1
2,997,870	-		CA265_RS12105	0.17	+0.6
2,997,872	+		CA265_RS12105	0.18	-0.2
2,997,872	+		CA265_RS12105	0.18	-0.3
2,997,873	-		CA265_RS12105	0.18	-0.2
2,997,953	-		CA265_RS12105	0.20	-0.2
2,997,958	+		CA265_RS12105	0.20	-0.4
2,997,967	+		CA265_RS12105	0.20	-2.0
2,997,968	-		CA265_RS12105	0.20	-2.7
2,997,968	-		CA265_RS12105	0.20	+0.3
2,997,968	-		CA265_RS12105	0.20	+0.2
2,997,971	+		CA265_RS12105	0.21	+0.1
2,997,971	+		CA265_RS12105	0.21	-0.7
2,998,012	+		CA265_RS12105	0.22	-0.4
2,998,012	+		CA265_RS12105	0.22	-0.1
2,998,034	+		CA265_RS12105	0.23	+0.4
2,998,051	+		CA265_RS12105	0.23	+0.5