Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3367

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
4,025,003	-				+0.4
4,025,003	-				+1.8
4,025,003	-				+0.8
4,025,086	+		Psyr_3366	0.20	-1.2
4,025,086	+		Psyr_3366	0.20	-0.4
4,025,086	+		Psyr_3366	0.20	+0.4
4,025,086	+		Psyr_3366	0.20	-1.2
4,025,086	+		Psyr_3366	0.20	+1.2
4,025,086	+		Psyr_3366	0.20	+0.2
4,025,086	+		Psyr_3366	0.20	-0.2
4,025,086	+		Psyr_3366	0.20	+0.8
4,025,087	-		Psyr_3366	0.21	-0.2
4,025,087	-		Psyr_3366	0.21	+0.1
4,025,087	-		Psyr_3366	0.21	-0.2
4,025,087	-		Psyr_3366	0.21	-0.7
4,025,087	-		Psyr_3366	0.21	-0.2
4,025,087	-		Psyr_3366	0.21	+1.1
4,025,156	-		Psyr_3366	0.31	-0.2
4,025,156	-		Psyr_3366	0.31	-0.2
4,025,156	-		Psyr_3366	0.31	-1.4
4,025,156	-		Psyr_3366	0.31	+1.8
4,025,550	+				-0.2
4,025,649	+				-1.0
4,025,650	-				-0.5
4,025,650	-				-2.5
4,025,650	-				+0.9
4,025,798	-				-0.3
4,025,820	+				+0.2
4,025,821	-				-0.2
4,025,867	+				-0.1
4,025,867	+				-1.5
4,025,867	+				-0.3
4,025,868	-				-0.2
4,025,868	-				-0.2
4,025,868	-				+0.1
4,025,868	-				-0.8
4,025,868	-				-1.1
4,025,868	-				+1.5
4,025,868	-				+0.8
4,025,918	+				+0.1
4,025,918	+				-0.8
4,025,918	+				+0.0
4,025,918	+				-0.1
4,025,918	+				+0.3
4,025,919	-				+0.2
4,025,940	+				-2.0
4,025,992	+		Psyr_3367	0.15	-0.5
4,025,993	-		Psyr_3367	0.15	-0.8
4,026,271	+		Psyr_3367	0.47	-0.2
4,026,372	+		Psyr_3367	0.59	+0.9
4,026,372	+		Psyr_3367	0.59	+0.5
4,026,373	-		Psyr_3367	0.59	-0.6
4,026,373	-		Psyr_3367	0.59	-0.8
4,026,619	-		Psyr_3367	0.88	-2.0
4,026,619	-		Psyr_3367	0.88	-0.1
4,026,627	+		Psyr_3367	0.89	-2.4
4,026,627	+		Psyr_3367	0.89	-0.2
4,026,628	-		Psyr_3367	0.89	-0.1
4,026,839	+				-1.4
4,026,839	+				+0.3
4,026,839	+				+0.0
4,026,839	+				-1.0
4,026,839	+				+0.6
4,026,839	+				-0.6
4,026,839	+				-0.2
4,026,840	-				+0.8
4,026,840	-				+0.6
4,026,843	-				+0.2
4,026,843	-				-1.8
4,027,094	+		Psyr_3368	0.30	+0.0
4,027,095	-		Psyr_3368	0.30	-1.0
4,027,095	-		Psyr_3368	0.30	-1.0
4,027,102	+		Psyr_3368	0.31	+0.2
4,027,220	+		Psyr_3368	0.40	-0.3
4,027,229	+		Psyr_3368	0.41	+0.2
4,027,230	-		Psyr_3368	0.41	-0.2
4,027,230	-		Psyr_3368	0.41	-1.2
4,027,413	-		Psyr_3368	0.56	-0.5
4,027,413	-		Psyr_3368	0.56	+0.2
4,027,415	+		Psyr_3368	0.56	+0.8
4,027,415	+		Psyr_3368	0.56	-1.4
4,027,416	-		Psyr_3368	0.57	+1.6
4,027,627	-		Psyr_3368	0.74	+0.2
4,027,652	+		Psyr_3368	0.76	+1.8