Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3120

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
3,739,656	+		Psyr_3119	0.31	-0.3
3,739,656	+		Psyr_3119	0.31	-2.8
3,739,656	+		Psyr_3119	0.31	+1.2
3,739,656	+		Psyr_3119	0.31	-0.1
3,739,656	+		Psyr_3119	0.31	-1.2
3,739,656	+		Psyr_3119	0.31	+3.4
3,739,657	-		Psyr_3119	0.31	-1.6
3,739,657	-		Psyr_3119	0.31	+0.8
3,739,657	-		Psyr_3119	0.31	+0.3
3,739,657	-		Psyr_3119	0.31	+1.2
3,739,806	+		Psyr_3119	0.42	-0.6
3,739,806	+		Psyr_3119	0.42	-1.5
3,739,806	+		Psyr_3119	0.42	+0.2
3,739,806	+		Psyr_3119	0.42	+1.0
3,739,807	-		Psyr_3119	0.42	-1.3
3,739,807	-		Psyr_3119	0.42	-1.9
3,739,807	-		Psyr_3119	0.42	-0.2
3,739,807	-		Psyr_3119	0.42	-0.6
3,740,025	+		Psyr_3119	0.58	-1.2
3,740,025	+		Psyr_3119	0.58	-0.2
3,740,026	-		Psyr_3119	0.58	+0.8
3,740,026	-		Psyr_3119	0.58	+0.9
3,740,050	-		Psyr_3119	0.60	-0.0
3,740,050	-		Psyr_3119	0.60	+1.0
3,740,160	+		Psyr_3119	0.68	+0.8
3,740,160	+		Psyr_3119	0.68	-2.2
3,740,160	+		Psyr_3119	0.68	+0.3
3,740,160	+		Psyr_3119	0.68	-0.6
3,740,160	+		Psyr_3119	0.68	+0.8
3,740,160	+		Psyr_3119	0.68	-1.0
3,740,160	+		Psyr_3119	0.68	-0.3
3,740,160	+		Psyr_3119	0.68	-0.2
3,740,160	+		Psyr_3119	0.68	+0.2
3,740,160	+		Psyr_3119	0.68	+1.8
3,740,160	+		Psyr_3119	0.68	+0.5
3,740,161	-		Psyr_3119	0.68	-0.1
3,740,161	-		Psyr_3119	0.68	-0.8
3,740,161	-		Psyr_3119	0.68	+0.8
3,740,161	-		Psyr_3119	0.68	-0.2
3,740,161	-		Psyr_3119	0.68	+0.2
3,740,161	-		Psyr_3119	0.68	-1.2
3,740,349	+		Psyr_3119	0.82	-0.0
3,740,350	-		Psyr_3119	0.82	+0.6
3,740,350	-		Psyr_3119	0.82	-1.2
3,740,534	+				-0.8
3,740,624	-				+0.2
3,740,624	-				+1.4
3,740,637	+				+0.5
3,740,637	+				+0.5
3,740,638	-				+0.8
3,740,638	-				+0.2
3,740,638	-				+0.1
3,740,638	-				+0.4
3,740,643	+				+1.5
3,740,643	+				-1.9
3,740,643	+				-0.8
3,740,644	-				-1.2
3,740,644	-				-2.0
3,740,676	+				+0.5
3,740,677	-				+2.0
3,740,774	-				+1.0
3,740,774	-				-0.4
3,740,790	-				+0.1
3,740,790	-				-1.2
3,740,790	-				+0.1
3,740,909	-		Psyr_3120	0.19	-0.7
3,741,127	+		Psyr_3120	0.35	-0.2
3,741,127	+		Psyr_3120	0.35	-1.5
3,741,128	-		Psyr_3120	0.35	-1.5
3,741,706	-		Psyr_3120	0.78	-0.4
3,741,907	+				+0.0
3,741,907	+				-1.0
3,741,908	-				-1.1
3,741,908	-				-1.0
3,742,104	+				-0.2
3,742,105	-				+1.0
3,742,105	-				+0.2
3,742,126	+				-0.6
3,742,127	-				-0.3
3,742,127	-				+1.3
3,742,127	-				+0.5
3,742,298	-		Psyr_3121	0.21	+0.4
3,742,578	+		Psyr_3121	0.64	+0.2
3,742,579	-		Psyr_3121	0.64	-0.3
3,742,579	-		Psyr_3121	0.64	+0.1
3,742,638	+		Psyr_3121	0.73	-2.9
3,742,654	-		Psyr_3121	0.75	+1.0
3,742,912	+				+0.4
3,742,913	-				+1.1
3,742,965	+		Psyr_3122	0.11	+0.9
3,742,976	+		Psyr_3122	0.12	+1.6
3,742,977	-		Psyr_3122	0.13	+0.2
3,742,977	-		Psyr_3122	0.13	+1.2