Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2991

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
3,581,570	+		Psyr_2989	0.65	+1.7
3,581,570	+		Psyr_2989	0.65	+0.3
3,581,570	+		Psyr_2989	0.65	-1.0
3,581,570	+		Psyr_2989	0.65	+0.1
3,581,571	-		Psyr_2989	0.65	+1.4
3,581,571	-		Psyr_2989	0.65	+0.7
3,581,571	-		Psyr_2989	0.65	+2.7
3,581,571	-		Psyr_2989	0.65	+1.1
3,581,621	+		Psyr_2989	0.70	+0.6
3,581,622	-		Psyr_2989	0.70	+0.0
3,581,622	-		Psyr_2989	0.70	+0.5
3,581,622	-		Psyr_2989	0.70	-0.1
3,581,622	-		Psyr_2989	0.70	+0.2
3,581,828	+				+0.4
3,581,829	-				-1.0
3,581,829	-				-1.7
3,581,926	+				-1.0
3,581,926	+				+0.2
3,581,927	-				+0.7
3,581,988	-				+0.7
3,582,071	-				-1.5
3,582,149	-				+0.3
3,582,236	+				+0.3
3,582,236	+				+1.7
3,582,236	+				+0.3
3,582,236	+				-0.0
3,582,236	+				+0.0
3,582,236	+				-0.5
3,582,236	+				+0.2
3,582,237	-				+0.6
3,582,237	-				-0.3
3,582,237	-				-0.8
3,582,237	-				+0.7
3,582,237	-				-0.1
3,582,239	+				+1.0
3,582,239	+				-1.8
3,582,265	+		Psyr_2990	0.22	+0.3
3,582,299	+		Psyr_2990	0.42	-0.1
3,582,300	-		Psyr_2990	0.43	-0.1
3,582,409	+				+0.2
3,582,409	+				+0.3
3,582,409	+				+0.2
3,582,561	+				+0.4
3,582,612	+		Psyr_2991	0.11	-2.1
3,582,613	-		Psyr_2991	0.11	-0.8
3,582,613	-		Psyr_2991	0.11	-1.2
3,582,613	-		Psyr_2991	0.11	-0.6
3,582,613	-		Psyr_2991	0.11	-0.3
3,582,613	-		Psyr_2991	0.11	+0.2
3,582,613	-		Psyr_2991	0.11	-0.6
3,582,883	-		Psyr_2991	0.66	-0.6
3,582,967	-		Psyr_2991	0.83	+0.2
3,582,967	-		Psyr_2991	0.83	-1.1
3,583,014	+				+0.2
3,583,015	-				+2.2
3,583,086	+				+1.5
3,583,149	-				+1.1
3,583,149	-				+0.7
3,583,184	+				-0.6
3,583,184	+				-1.5
3,583,220	-				-0.3
3,583,284	+				-2.1
3,583,284	+				+0.7
3,583,285	-				+0.7
3,583,502	+				+1.2
3,583,502	+				-0.5
3,583,502	+				+0.0
3,583,503	-				-0.2
3,583,503	-				-0.8
3,583,503	-				-0.1
3,583,503	-				+0.6
3,583,503	-				+0.1
3,583,503	-				+0.5
3,583,503	-				+0.5
3,583,503	-				-2.4
3,583,503	-				+0.1
3,583,503	-				+0.3
3,583,503	-				-0.8
3,583,503	-				-1.3
3,583,503	-				+0.4
3,583,503	-				+0.4
3,583,503	-				-1.1
3,583,508	-				-1.0
3,583,552	+				+0.7
3,583,553	-				+0.3
3,583,553	-				+0.6
3,583,584	+				+0.2
3,583,593	+				+0.0
3,583,593	+				+0.7
3,583,594	-				-0.4
3,583,594	-				-0.3
3,583,594	-				-1.3
3,583,594	-				-1.7
3,583,594	-				-0.8
3,583,594	-				+0.7
3,583,594	-				+0.6
3,583,594	-				-0.1
3,583,594	-				+0.2
3,583,594	-				-0.1
3,583,594	-				+0.6
3,583,594	-				-0.0
3,583,594	-				+0.0
3,583,709	+				+1.4
3,583,968	-		Psyr_2992	0.19	-0.9