Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19310

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
4,169,175	+				-1.1
4,169,176	-				+0.3
4,169,176	-				+1.7
4,169,176	-				-1.3
4,169,176	-				-0.3
4,169,176	-				+0.3
4,169,266	+		RR42_RS19310	0.13	-0.9
4,169,266	+		RR42_RS19310	0.13	-0.6
4,169,570	-		RR42_RS19310	0.29	+2.1
4,169,570	-		RR42_RS19310	0.29	-1.2
4,169,570	-		RR42_RS19310	0.29	-1.9
4,169,608	+		RR42_RS19310	0.31	-0.5
4,169,609	-		RR42_RS19310	0.32	-3.0
4,169,609	-		RR42_RS19310	0.32	+0.1
4,169,613	+		RR42_RS19310	0.32	-0.7
4,169,613	+		RR42_RS19310	0.32	+0.4
4,169,613	+		RR42_RS19310	0.32	-1.9
4,169,613	+		RR42_RS19310	0.32	-3.6
4,169,614	-		RR42_RS19310	0.32	+3.1
4,169,614	-		RR42_RS19310	0.32	-2.2
4,169,660	-		RR42_RS19310	0.34	-1.9
4,169,660	-		RR42_RS19310	0.34	-1.4
4,169,718	+		RR42_RS19310	0.37	+0.5
4,169,866	-		RR42_RS19310	0.45	-1.1
4,169,922	+		RR42_RS19310	0.48	-1.1
4,169,922	+		RR42_RS19310	0.48	-2.8
4,169,922	+		RR42_RS19310	0.48	-1.5
4,169,922	+		RR42_RS19310	0.48	-1.8
4,169,923	-		RR42_RS19310	0.48	-1.1
4,169,923	-		RR42_RS19310	0.48	-2.6
4,169,923	-		RR42_RS19310	0.48	-0.9
4,169,923	-		RR42_RS19310	0.48	-3.3
4,169,925	+		RR42_RS19310	0.48	-2.6
4,169,925	+		RR42_RS19310	0.48	-0.5
4,169,925	+		RR42_RS19310	0.48	-2.7
4,170,087	+		RR42_RS19310	0.57	-1.6
4,170,088	-		RR42_RS19310	0.57	-2.3
4,170,088	-		RR42_RS19310	0.57	+1.5
4,170,120	+		RR42_RS19310	0.59	-0.7
4,170,121	-		RR42_RS19310	0.59	-1.6
4,170,159	+		RR42_RS19310	0.61	-1.4
4,170,159	+		RR42_RS19310	0.61	-2.9
4,170,159	+		RR42_RS19310	0.61	+0.5
4,170,159	+		RR42_RS19310	0.61	-2.1
4,170,159	+		RR42_RS19310	0.61	-2.5
4,170,211	+		RR42_RS19310	0.64	-0.5
4,170,266	-		RR42_RS19310	0.67	+2.1
4,170,417	+		RR42_RS19310	0.75	-1.8
4,170,417	+		RR42_RS19310	0.75	-3.4
4,170,418	-		RR42_RS19310	0.75	-1.2
4,170,418	-		RR42_RS19310	0.75	-2.4
4,170,418	-		RR42_RS19310	0.75	-1.2
4,170,418	-		RR42_RS19310	0.75	-1.2
4,170,449	+		RR42_RS19310	0.77	-1.2
4,170,450	-		RR42_RS19310	0.77	-3.9
4,170,450	-		RR42_RS19310	0.77	-0.7
4,170,450	-		RR42_RS19310	0.77	-2.7
4,170,450	-		RR42_RS19310	0.77	-4.0
4,170,485	-		RR42_RS19310	0.78	-1.5
4,170,543	+		RR42_RS19310	0.82	-2.4
4,170,543	+		RR42_RS19310	0.82	-4.8
4,170,543	+		RR42_RS19310	0.82	-1.7
4,170,543	+		RR42_RS19310	0.82	-2.3
4,170,544	-		RR42_RS19310	0.82	-0.8
4,170,544	-		RR42_RS19310	0.82	-0.7
4,170,544	-		RR42_RS19310	0.82	-2.0
4,170,544	-		RR42_RS19310	0.82	-1.7
4,170,744	+				-0.2
4,170,886	+				-0.2
4,170,886	+				-2.7
4,170,886	+				-0.7
4,170,886	+				+1.1
4,170,886	+				-0.9
4,170,886	+				-2.0
4,170,887	-				-4.2
4,170,887	-				-2.2
4,170,887	-				-2.0
4,170,887	-				-1.8
4,170,898	-				-1.6
4,170,898	-				-2.0
4,170,924	+				-1.4
4,170,930	+				-2.1
4,170,930	+				-0.9
4,170,931	-				+0.9
4,170,931	-				-0.6
4,170,931	-				-0.2
4,170,931	-				-0.1
4,170,949	-				+0.5
4,170,949	-				-1.1
4,170,953	-				+0.6
4,170,953	-				-0.8
4,170,953	-				+0.0
4,170,953	-				-0.8
4,171,035	+				+0.0
4,171,036	-				-0.5
4,171,076	+				-0.3
4,171,088	+				+0.4
4,171,088	+				-0.1
4,171,090	+				+0.6
4,171,091	-				-0.8
4,171,091	-				-0.6
4,171,091	-				+0.6
4,171,091	-				-0.8
4,171,091	-				+0.2
4,171,091	-				+0.1
4,171,091	-				+0.7
4,171,091	-				-0.1
4,171,094	+				-0.5
4,171,094	-				+0.0
4,171,095	-				-1.0
4,171,095	-				-1.2
4,171,095	-				+1.0
4,171,095	-				-0.7
4,171,100	-				+0.8
4,171,100	-				+1.3
4,171,103	+				-0.5
4,171,103	+				+2.1
4,171,104	-				+0.7
4,171,104	-				+0.5
4,171,104	-				-2.7
4,171,104	-				+0.3
4,171,104	-				-1.6
4,171,179	+				-3.1