Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13825 and ABID97_RS13830 are separated by 10 nucleotides ABID97_RS13830 and ABID97_RS13835 are separated by 107 nucleotides ABID97_RS13835 and ABID97_RS13840 are separated by 2 nucleotides ABID97_RS13840 and ABID97_RS13845 are separated by 2 nucleotides
ABID97_RS13825: ABID97_RS13825 - hypothetical protein, at 2,869,582 to 2,869,995
_RS13825
ABID97_RS13830: ABID97_RS13830 - hypothetical protein, at 2,870,006 to 2,870,791
_RS13830
ABID97_RS13835: ABID97_RS13835 - phage tail tape measure protein, at 2,870,899 to 2,873,619
_RS13835
ABID97_RS13840: ABID97_RS13840 - hypothetical protein, at 2,873,622 to 2,874,017
_RS13840
ABID97_RS13845: ABID97_RS13845 - hypothetical protein, at 2,874,020 to 2,877,601
_RS13845
Position (kb)
2870
2871
2872
2873
2874 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2870.258 kb on + strand, within ABID97_RS13830 at 2870.259 kb on - strand, within ABID97_RS13830 at 2870.259 kb on - strand, within ABID97_RS13830 at 2870.439 kb on - strand, within ABID97_RS13830 at 2870.556 kb on - strand, within ABID97_RS13830 at 2870.645 kb on + strand, within ABID97_RS13830 at 2871.302 kb on - strand, within ABID97_RS13835 at 2871.427 kb on + strand, within ABID97_RS13835 at 2871.428 kb on - strand, within ABID97_RS13835 at 2873.369 kb on - strand at 2873.516 kb on - strand at 2873.617 kb on + strand at 2873.617 kb on + strand at 2873.617 kb on + strand at 2873.618 kb on - strand at 2873.618 kb on - strand at 2873.618 kb on - strand at 2873.980 kb on - strand at 2874.534 kb on - strand, within ABID97_RS13845 at 2874.534 kb on - strand, within ABID97_RS13845
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,870,258 + ABID97_RS13830 0.32 -0.2 2,870,259 - ABID97_RS13830 0.32 -2.2 2,870,259 - ABID97_RS13830 0.32 -0.1 2,870,439 - ABID97_RS13830 0.55 -0.3 2,870,556 - ABID97_RS13830 0.70 -0.3 2,870,645 + ABID97_RS13830 0.81 -2.1 2,871,302 - ABID97_RS13835 0.15 -0.5 2,871,427 + ABID97_RS13835 0.19 -2.2 2,871,428 - ABID97_RS13835 0.19 -0.6 2,873,369 - -1.1 2,873,516 - -0.9 2,873,617 + -2.4 2,873,617 + -2.4 2,873,617 + -1.1 2,873,618 - -1.3 2,873,618 - -2.3 2,873,618 - -2.6 2,873,980 - -1.0 2,874,534 - ABID97_RS13845 0.14 -0.9 2,874,534 - ABID97_RS13845 0.14 -3.1
Or see this region's nucleotide sequence