Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS10515

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,034,172	+		ABIE40_RS10510	0.36	+1.3
2,034,172	+		ABIE40_RS10510	0.36	-0.8
2,034,172	+		ABIE40_RS10510	0.36	-0.1
2,034,172	+		ABIE40_RS10510	0.36	-1.1
2,034,173	-		ABIE40_RS10510	0.36	-1.5
2,034,313	+		ABIE40_RS10510	0.46	-1.0
2,034,313	+		ABIE40_RS10510	0.46	+1.4
2,034,313	+		ABIE40_RS10510	0.46	+0.3
2,034,314	-		ABIE40_RS10510	0.46	-0.8
2,034,314	-		ABIE40_RS10510	0.46	-0.4
2,034,314	-		ABIE40_RS10510	0.46	-1.5
2,034,314	-		ABIE40_RS10510	0.46	+1.4
2,034,314	-		ABIE40_RS10510	0.46	+0.5
2,034,314	-		ABIE40_RS10510	0.46	+0.7
2,034,316	+		ABIE40_RS10510	0.47	-1.4
2,034,316	+		ABIE40_RS10510	0.47	-1.5
2,034,316	+		ABIE40_RS10510	0.47	-0.5
2,034,317	-		ABIE40_RS10510	0.47	+0.7
2,034,317	-		ABIE40_RS10510	0.47	+0.6
2,034,317	-		ABIE40_RS10510	0.47	-0.8
2,034,439	+		ABIE40_RS10510	0.56	-1.4
2,034,439	+		ABIE40_RS10510	0.56	-0.4
2,034,439	+		ABIE40_RS10510	0.56	+0.3
2,034,440	-		ABIE40_RS10510	0.56	-0.1
2,034,440	-		ABIE40_RS10510	0.56	-2.2
2,034,440	-		ABIE40_RS10510	0.56	-0.2
2,034,440	-		ABIE40_RS10510	0.56	+0.4
2,034,441	+		ABIE40_RS10510	0.56	+2.6
2,034,441	+		ABIE40_RS10510	0.56	-0.1
2,034,441	+		ABIE40_RS10510	0.56	-0.1
2,034,441	+		ABIE40_RS10510	0.56	-0.0
2,034,442	-		ABIE40_RS10510	0.56	+0.2
2,034,442	-		ABIE40_RS10510	0.56	+0.9
2,034,442	-		ABIE40_RS10510	0.56	+0.1
2,034,520	+		ABIE40_RS10510	0.62	+0.3
2,034,520	+		ABIE40_RS10510	0.62	-1.9
2,034,521	-		ABIE40_RS10510	0.62	+0.0
2,034,563	-		ABIE40_RS10510	0.66	+0.1
2,034,563	-		ABIE40_RS10510	0.66	+1.6
2,034,639	+		ABIE40_RS10510	0.72	-3.8
2,034,639	+		ABIE40_RS10510	0.72	-0.2
2,034,640	-		ABIE40_RS10510	0.72	-0.9
2,034,700	+		ABIE40_RS10510	0.76	+0.1
2,034,700	+		ABIE40_RS10510	0.76	-0.4
2,034,701	-		ABIE40_RS10510	0.76	-0.3
2,034,701	-		ABIE40_RS10510	0.76	-0.6
2,034,701	-		ABIE40_RS10510	0.76	-1.0
2,034,701	-		ABIE40_RS10510	0.76	+0.1
2,034,701	-		ABIE40_RS10510	0.76	-1.7
2,034,811	+		ABIE40_RS10510	0.85	+2.9
2,034,811	+		ABIE40_RS10510	0.85	-1.8
2,034,812	-		ABIE40_RS10510	0.85	-0.2
2,034,812	-		ABIE40_RS10510	0.85	+0.6
2,034,820	+		ABIE40_RS10510	0.85	-1.1
2,034,820	+		ABIE40_RS10510	0.85	-0.2
2,034,820	+		ABIE40_RS10510	0.85	+0.4
2,034,820	+		ABIE40_RS10510	0.85	+0.5
2,034,820	+		ABIE40_RS10510	0.85	+0.4
2,034,820	+		ABIE40_RS10510	0.85	-0.8
2,034,821	-		ABIE40_RS10510	0.86	+0.2
2,034,821	-		ABIE40_RS10510	0.86	+0.5
2,034,821	-		ABIE40_RS10510	0.86	-0.5
2,034,821	-		ABIE40_RS10510	0.86	-0.5
2,034,821	-		ABIE40_RS10510	0.86	-0.5
2,034,847	+		ABIE40_RS10510	0.88	+0.4
2,034,848	-		ABIE40_RS10510	0.88	-2.7
2,034,848	-		ABIE40_RS10510	0.88	+0.4
2,034,919	+				+0.4
2,034,920	-				-0.0
2,034,946	-				+1.8
2,035,041	-				+0.8
2,035,052	+				-1.5
2,035,052	+				-2.6
2,035,052	+				-1.6
2,035,052	+				-3.8
2,035,052	+				-1.2
2,035,052	+				-1.9
2,035,052	+				-2.0
2,035,052	+				-1.2
2,035,052	+				-1.5
2,035,053	-				-0.3
2,035,053	-				-1.2
2,035,053	-				-0.9
2,035,053	-				-1.9
2,035,053	-				+0.3
2,035,053	-				-1.7
2,035,053	-				-0.5
2,035,053	-				+2.6
2,035,053	-				-2.1
2,035,053	-				-0.3
2,035,053	-				-3.0
2,035,053	-				-1.5
2,035,053	-				+1.4
2,035,141	-				-0.7
2,035,307	+		ABIE40_RS10515	0.21	+0.1
2,035,307	+		ABIE40_RS10515	0.21	-2.9
2,035,308	-		ABIE40_RS10515	0.21	-2.6
2,035,415	+		ABIE40_RS10515	0.29	-0.7
2,035,416	-		ABIE40_RS10515	0.29	-0.9
2,035,416	-		ABIE40_RS10515	0.29	-1.7
2,035,496	+		ABIE40_RS10515	0.35	-0.3
2,035,497	-		ABIE40_RS10515	0.35	-3.5
2,035,497	-		ABIE40_RS10515	0.35	+0.6
2,035,524	-		ABIE40_RS10515	0.37	-1.9
2,035,594	-		ABIE40_RS10515	0.42	+1.6
2,035,799	+		ABIE40_RS10515	0.57	-0.7
2,035,857	+		ABIE40_RS10515	0.61	+1.6
2,035,857	+		ABIE40_RS10515	0.61	-1.8
2,035,859	+		ABIE40_RS10515	0.61	+0.1
2,035,860	-		ABIE40_RS10515	0.61	-1.2
2,035,953	+		ABIE40_RS10515	0.68	-2.5
2,035,953	+		ABIE40_RS10515	0.68	-0.9
2,035,953	+		ABIE40_RS10515	0.68	-0.5
2,035,954	-		ABIE40_RS10515	0.68	-1.5
2,035,954	-		ABIE40_RS10515	0.68	-1.1
2,036,102	+		ABIE40_RS10515	0.79	-3.3
2,036,103	-		ABIE40_RS10515	0.79	-2.8
2,036,103	-		ABIE40_RS10515	0.79	-2.3
2,036,103	-		ABIE40_RS10515	0.79	+0.1
2,036,231	+		ABIE40_RS10515	0.88	-1.6
2,036,231	+		ABIE40_RS10515	0.88	-2.1
2,036,232	-		ABIE40_RS10515	0.88	-1.7
2,036,232	-		ABIE40_RS10515	0.88	-2.7
2,036,289	-				-3.2
2,036,344	+				-2.8
2,036,344	+				-1.2
2,036,344	+				+2.6
2,036,345	-				-1.1
2,036,345	-				-2.0
2,036,345	-				-2.9
2,036,345	-				-1.5
2,036,381	+				-2.5
2,036,381	+				+0.1
2,036,381	+				-1.2
2,036,382	-				-0.8
2,036,382	-				-2.8
2,036,387	+				-1.6
2,036,387	+				-1.7
2,036,388	-				-1.9
2,036,388	-				-1.5
2,036,388	-				-1.7
2,036,388	-				-1.5
2,036,443	+				-0.2
2,036,443	+				-0.8
2,036,443	+				+0.6
2,036,443	+				+2.0
2,036,443	+				+1.2
2,036,443	+				-0.2
2,036,443	+				-0.4
2,036,443	+				+0.9
2,036,443	+				-2.4
2,036,443	+				-1.7
2,036,444	-				+0.1
2,036,445	+				-1.3
2,036,445	+				+1.4
2,036,445	+				-0.5
2,036,445	+				+1.5
2,036,445	+				-0.8
2,036,445	+				-2.0
2,036,445	+				-0.7
2,036,445	+				+1.4
2,036,445	+				-0.6
2,036,445	+				+0.6
2,036,445	+				+2.6
2,036,445	+				+1.2
2,036,445	+				-1.5
2,036,446	-				+0.0
2,036,446	-				+0.4
2,036,446	-				+0.3
2,036,446	-				+0.1
2,036,446	-				+1.6
2,036,446	-				-0.1
2,036,448	+				+0.7
2,036,448	+				-1.4
2,036,448	+				+1.7
2,036,448	+				+0.3
2,036,449	-				+0.2
2,036,516	+				-1.2
2,036,517	-				-0.8
2,036,517	-				-4.2
2,036,517	-				-1.2
2,036,517	-				-1.2
2,037,170	-				+0.3
2,037,170	-				+1.6