Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS29010 and ABIE40_RS29015 are separated by 560 nucleotides
ABIE40_RS29010: ABIE40_RS29010 - hypothetical protein, at 499,303 to 499,440
_RS29010
ABIE40_RS29015: ABIE40_RS29015 - molecular chaperone HtpG, at 500,001 to 501,887
_RS29015
Position (kb) 499
500 Strain fitness (log2 ratio) -2
-1
0
1
2 at 498.314 kb on + strand at 498.350 kb on + strand at 498.350 kb on + strand at 498.350 kb on + strand at 498.351 kb on - strand at 498.382 kb on + strand at 498.401 kb on - strand at 498.438 kb on + strand at 498.438 kb on + strand at 498.438 kb on + strand at 498.439 kb on - strand at 498.460 kb on + strand at 498.460 kb on + strand at 498.490 kb on + strand at 498.550 kb on - strand at 498.606 kb on - strand at 498.636 kb on + strand at 498.637 kb on - strand at 498.643 kb on - strand at 498.671 kb on - strand at 498.704 kb on - strand at 498.760 kb on - strand at 499.027 kb on + strand at 499.027 kb on + strand at 499.028 kb on - strand at 499.028 kb on - strand at 499.028 kb on - strand at 499.028 kb on - strand at 499.062 kb on - strand at 499.125 kb on + strand at 499.125 kb on + strand at 499.125 kb on + strand at 499.125 kb on + strand at 499.126 kb on - strand at 499.176 kb on + strand at 499.177 kb on - strand at 499.193 kb on - strand at 499.205 kb on - strand at 499.237 kb on + strand at 499.237 kb on + strand at 499.237 kb on + strand at 499.375 kb on - strand, within ABIE40_RS29010 at 499.460 kb on + strand at 499.461 kb on - strand at 499.461 kb on - strand at 499.492 kb on - strand at 499.492 kb on - strand at 499.546 kb on + strand at 499.546 kb on + strand at 499.546 kb on + strand at 499.546 kb on + strand at 499.546 kb on + strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.547 kb on - strand at 499.551 kb on + strand at 499.552 kb on - strand at 499.734 kb on + strand at 499.735 kb on - strand at 499.735 kb on - strand at 499.861 kb on - strand at 499.861 kb on - strand at 499.863 kb on + strand at 499.864 kb on - strand at 499.940 kb on + strand at 499.940 kb on + strand at 499.946 kb on - strand at 499.946 kb on - strand at 499.981 kb on + strand at 499.981 kb on + strand at 499.982 kb on - strand at 499.982 kb on - strand at 500.103 kb on + strand at 500.104 kb on - strand at 500.154 kb on - strand at 500.182 kb on - strand at 500.232 kb on + strand, within ABIE40_RS29015 at 500.232 kb on + strand, within ABIE40_RS29015 at 500.233 kb on - strand, within ABIE40_RS29015 at 500.233 kb on - strand, within ABIE40_RS29015 at 500.233 kb on - strand, within ABIE40_RS29015 at 500.310 kb on - strand, within ABIE40_RS29015 at 500.380 kb on - strand, within ABIE40_RS29015 at 500.390 kb on + strand, within ABIE40_RS29015 at 500.390 kb on + strand, within ABIE40_RS29015 at 500.391 kb on - strand, within ABIE40_RS29015 at 500.408 kb on + strand, within ABIE40_RS29015 at 500.408 kb on + strand, within ABIE40_RS29015 at 500.408 kb on + strand, within ABIE40_RS29015 at 500.409 kb on - strand, within ABIE40_RS29015 at 500.411 kb on + strand, within ABIE40_RS29015 at 500.424 kb on - strand, within ABIE40_RS29015 at 500.427 kb on + strand, within ABIE40_RS29015 at 500.428 kb on - strand, within ABIE40_RS29015
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 498,314 + -0.8 498,350 + -1.0 498,350 + +0.3 498,350 + +0.6 498,351 - -2.4 498,382 + +0.2 498,401 - -0.9 498,438 + +0.2 498,438 + +1.0 498,438 + +0.1 498,439 - -0.0 498,460 + +1.9 498,460 + +1.5 498,490 + +0.1 498,550 - +0.4 498,606 - +0.2 498,636 + -1.4 498,637 - +0.8 498,643 - +0.3 498,671 - +1.8 498,704 - +0.2 498,760 - +0.8 499,027 + +0.1 499,027 + +0.3 499,028 - +1.0 499,028 - +0.3 499,028 - +1.9 499,028 - -0.7 499,062 - -0.3 499,125 + -0.9 499,125 + +0.8 499,125 + +0.5 499,125 + +0.3 499,126 - -2.1 499,176 + -0.7 499,177 - +1.9 499,193 - -1.1 499,205 - -1.4 499,237 + +0.3 499,237 + +0.5 499,237 + -0.5 499,375 - ABIE40_RS29010 0.52 -1.2 499,460 + -0.1 499,461 - +0.3 499,461 - +1.0 499,492 - -0.1 499,492 - +0.6 499,546 + -0.5 499,546 + +0.1 499,546 + +0.5 499,546 + +1.1 499,546 + -0.6 499,547 - +0.1 499,547 - +0.0 499,547 - +0.0 499,547 - -0.6 499,547 - -0.2 499,547 - +0.9 499,547 - -1.2 499,547 - -0.1 499,547 - +0.0 499,547 - -0.4 499,551 + -1.2 499,552 - +0.3 499,734 + -0.2 499,735 - -0.1 499,735 - -0.1 499,861 - -0.7 499,861 - -0.4 499,863 + -0.2 499,864 - +0.4 499,940 + +0.3 499,940 + +0.6 499,946 - +0.2 499,946 - +0.8 499,981 + +1.3 499,981 + -0.9 499,982 - +0.7 499,982 - +0.4 500,103 + +0.1 500,104 - +0.1 500,154 - -0.2 500,182 - -0.6 500,232 + ABIE40_RS29015 0.12 +0.6 500,232 + ABIE40_RS29015 0.12 +1.6 500,233 - ABIE40_RS29015 0.12 -0.6 500,233 - ABIE40_RS29015 0.12 -0.9 500,233 - ABIE40_RS29015 0.12 +0.4 500,310 - ABIE40_RS29015 0.16 +0.3 500,380 - ABIE40_RS29015 0.20 -0.0 500,390 + ABIE40_RS29015 0.21 -0.4 500,390 + ABIE40_RS29015 0.21 +1.0 500,391 - ABIE40_RS29015 0.21 -0.7 500,408 + ABIE40_RS29015 0.22 +0.2 500,408 + ABIE40_RS29015 0.22 -0.8 500,408 + ABIE40_RS29015 0.22 -1.6 500,409 - ABIE40_RS29015 0.22 -0.4 500,411 + ABIE40_RS29015 0.22 -0.7 500,424 - ABIE40_RS29015 0.22 +0.6 500,427 + ABIE40_RS29015 0.23 +2.1 500,428 - ABIE40_RS29015 0.23 +0.0
Or see this region's nucleotide sequence