Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2654 and Dsui_2655 overlap by 4 nucleotides Dsui_2655 and Dsui_2656 are separated by 13 nucleotides Dsui_2656 and Dsui_2657 are separated by 234 nucleotides
Dsui_2654: Dsui_2654 - DNA polymerase III, delta'' subunit, at 2,809,403 to 2,810,428
_2654
Dsui_2655: Dsui_2655 - thymidylate kinase, at 2,810,425 to 2,811,036
_2655
Dsui_2656: Dsui_2656 - conserved hypothetical protein, YceG family, at 2,811,050 to 2,812,045
_2656
Dsui_2657: Dsui_2657 - folate-binding protein YgfZ, at 2,812,280 to 2,813,299
_2657
Position (kb)
2811
2812
2813 Strain fitness (log2 ratio)
-1
0
1
2 at 2811.094 kb on + strand at 2811.250 kb on + strand at 2811.250 kb on - strand, within Dsui_2656 at 2811.265 kb on + strand, within Dsui_2656 at 2811.273 kb on - strand, within Dsui_2656 at 2811.327 kb on + strand, within Dsui_2656 at 2811.434 kb on + strand, within Dsui_2656 at 2811.446 kb on - strand, within Dsui_2656 at 2811.537 kb on - strand, within Dsui_2656 at 2811.570 kb on + strand at 2811.658 kb on + strand at 2811.665 kb on - strand, within Dsui_2656 at 2811.666 kb on - strand, within Dsui_2656 at 2811.711 kb on + strand at 2811.792 kb on - strand, within Dsui_2656 at 2811.831 kb on + strand, within Dsui_2656 at 2811.917 kb on - strand, within Dsui_2656 at 2811.975 kb on - strand at 2812.003 kb on - strand at 2812.070 kb on - strand at 2812.089 kb on - strand at 2812.139 kb on + strand at 2812.154 kb on + strand at 2812.253 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,811,094 + +2.0 2,811,250 + +2.6 2,811,250 - Dsui_2656 0.20 +0.2 2,811,265 + Dsui_2656 0.22 +0.7 2,811,273 - Dsui_2656 0.22 +0.3 2,811,327 + Dsui_2656 0.28 -0.1 2,811,434 + Dsui_2656 0.39 +1.3 2,811,446 - Dsui_2656 0.40 -0.4 2,811,537 - Dsui_2656 0.49 -0.3 2,811,570 + +1.0 2,811,658 + +0.5 2,811,665 - Dsui_2656 0.62 +1.1 2,811,666 - Dsui_2656 0.62 +0.4 2,811,711 + +2.0 2,811,792 - Dsui_2656 0.74 +0.6 2,811,831 + Dsui_2656 0.78 +0.7 2,811,917 - Dsui_2656 0.87 +0.6 2,811,975 - -1.0 2,812,003 - +0.0 2,812,070 - +0.5 2,812,089 - +1.1 2,812,139 + +0.3 2,812,154 + +0.3 2,812,253 - +1.0
Or see this region's nucleotide sequence