Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2267 and Dsui_2268 are separated by 466 nucleotides Dsui_2268 and Dsui_2269 are separated by 45 nucleotides Dsui_2269 and Dsui_2270 are separated by 280 nucleotides
Dsui_2267: Dsui_2267 - hypothetical protein, at 2,418,914 to 2,419,648
_2267
Dsui_2268: Dsui_2268 - putative lactoylglutathione lyase, at 2,420,115 to 2,420,552
_2268
Dsui_2269: Dsui_2269 - SOS regulatory protein LexA, at 2,420,598 to 2,421,209
_2269
Dsui_2270: Dsui_2270 - hypothetical protein, at 2,421,490 to 2,421,693
_2270
Position (kb)
2420
2421 Strain fitness (log2 ratio)
-1
0
1 at 2419.517 kb on + strand at 2419.522 kb on + strand at 2419.620 kb on - strand at 2419.659 kb on + strand at 2419.850 kb on - strand at 2419.855 kb on + strand at 2419.863 kb on - strand at 2419.972 kb on - strand at 2419.979 kb on - strand at 2420.007 kb on - strand at 2420.177 kb on + strand at 2420.234 kb on - strand, within Dsui_2268 at 2420.269 kb on + strand at 2420.269 kb on + strand at 2420.269 kb on + strand at 2420.277 kb on - strand, within Dsui_2268 at 2420.277 kb on - strand, within Dsui_2268 at 2420.342 kb on + strand at 2420.411 kb on + strand at 2420.424 kb on - strand, within Dsui_2268 at 2420.469 kb on + strand at 2420.530 kb on - strand at 2420.959 kb on - strand, within Dsui_2269 at 2421.207 kb on - strand at 2421.440 kb on + strand at 2421.487 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 2,419,517 + +1.7 2,419,522 + +1.7 2,419,620 - +1.7 2,419,659 + +0.7 2,419,850 - +1.7 2,419,855 + +1.7 2,419,863 - +0.1 2,419,972 - -0.0 2,419,979 - +0.4 2,420,007 - +1.0 2,420,177 + -0.3 2,420,234 - Dsui_2268 0.27 +0.4 2,420,269 + +0.7 2,420,269 + -0.6 2,420,269 + +0.7 2,420,277 - Dsui_2268 0.37 +0.7 2,420,277 - Dsui_2268 0.37 +0.3 2,420,342 + +0.1 2,420,411 + +0.1 2,420,424 - Dsui_2268 0.71 +1.5 2,420,469 + +0.7 2,420,530 - -0.7 2,420,959 - Dsui_2269 0.59 +0.2 2,421,207 - +0.4 2,421,440 + +1.7 2,421,487 + +0.7
Or see this region's nucleotide sequence