Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0965 and Dsui_0966 are separated by 219 nucleotides Dsui_0966 and Dsui_0967 are separated by 98 nucleotides Dsui_0967 and Dsui_0968 are separated by 54 nucleotides
Dsui_0965: Dsui_0965 - putative membrane protein, at 990,086 to 990,778
_0965
Dsui_0966: Dsui_0966 - methyl-accepting chemotaxis protein, at 990,998 to 993,025
_0966
Dsui_0967: Dsui_0967 - hypothetical protein, at 993,124 to 993,459
_0967
Dsui_0968: Dsui_0968 - deoxyinosine 3'endonuclease (endonuclease V), at 993,514 to 994,167
_0968
Position (kb) 990
991
992
993
994 Strain fitness (log2 ratio) -1
0
1 at 990.023 kb on - strand at 990.091 kb on - strand at 990.205 kb on + strand, within Dsui_0965 at 990.216 kb on + strand, within Dsui_0965 at 990.293 kb on + strand, within Dsui_0965 at 990.365 kb on + strand, within Dsui_0965 at 990.366 kb on + strand, within Dsui_0965 at 990.366 kb on + strand, within Dsui_0965 at 990.373 kb on - strand, within Dsui_0965 at 990.428 kb on - strand, within Dsui_0965 at 990.494 kb on - strand, within Dsui_0965 at 990.494 kb on - strand at 990.494 kb on - strand, within Dsui_0965 at 990.598 kb on + strand, within Dsui_0965 at 990.606 kb on - strand, within Dsui_0965 at 990.693 kb on - strand, within Dsui_0965 at 990.722 kb on + strand at 990.723 kb on - strand at 990.741 kb on - strand at 990.867 kb on - strand at 990.880 kb on - strand at 990.941 kb on + strand at 991.298 kb on + strand, within Dsui_0966 at 991.352 kb on + strand, within Dsui_0966 at 991.352 kb on + strand, within Dsui_0966 at 991.362 kb on + strand, within Dsui_0966 at 991.365 kb on - strand, within Dsui_0966 at 991.440 kb on + strand, within Dsui_0966 at 991.440 kb on + strand, within Dsui_0966 at 991.450 kb on + strand at 991.582 kb on - strand, within Dsui_0966 at 991.588 kb on - strand at 991.713 kb on - strand, within Dsui_0966 at 991.720 kb on + strand at 991.811 kb on - strand at 991.965 kb on + strand, within Dsui_0966 at 992.013 kb on + strand at 992.014 kb on - strand at 992.148 kb on + strand, within Dsui_0966 at 992.170 kb on - strand at 992.484 kb on + strand, within Dsui_0966 at 992.492 kb on - strand at 992.585 kb on + strand, within Dsui_0966 at 993.364 kb on + strand, within Dsui_0967 at 993.372 kb on - strand, within Dsui_0967 at 993.380 kb on + strand, within Dsui_0967 at 993.405 kb on - strand, within Dsui_0967 at 993.695 kb on - strand, within Dsui_0968 at 993.789 kb on - strand, within Dsui_0968
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 990,023 - -0.2 990,091 - +0.4 990,205 + Dsui_0965 0.17 +0.1 990,216 + Dsui_0965 0.19 -0.3 990,293 + Dsui_0965 0.30 +0.5 990,365 + Dsui_0965 0.40 +0.1 990,366 + Dsui_0965 0.40 -0.0 990,366 + Dsui_0965 0.40 -0.1 990,373 - Dsui_0965 0.41 -1.1 990,428 - Dsui_0965 0.49 -0.1 990,494 - Dsui_0965 0.59 +1.4 990,494 - +1.4 990,494 - Dsui_0965 0.59 -0.2 990,598 + Dsui_0965 0.74 +0.5 990,606 - Dsui_0965 0.75 -0.4 990,693 - Dsui_0965 0.88 +0.2 990,722 + -0.3 990,723 - +0.3 990,741 - +0.9 990,867 - -0.6 990,880 - +0.3 990,941 + -0.1 991,298 + Dsui_0966 0.15 +1.3 991,352 + Dsui_0966 0.17 +0.7 991,352 + Dsui_0966 0.17 -1.1 991,362 + Dsui_0966 0.18 +0.6 991,365 - Dsui_0966 0.18 +0.7 991,440 + Dsui_0966 0.22 +0.8 991,440 + Dsui_0966 0.22 +0.4 991,450 + +0.5 991,582 - Dsui_0966 0.29 +0.1 991,588 - +0.1 991,713 - Dsui_0966 0.35 +1.3 991,720 + -0.6 991,811 - +0.1 991,965 + Dsui_0966 0.48 +0.5 992,013 + +0.9 992,014 - +1.7 992,148 + Dsui_0966 0.57 +0.9 992,170 - +1.1 992,484 + Dsui_0966 0.73 +0.1 992,492 - -0.3 992,585 + Dsui_0966 0.78 +1.4 993,364 + Dsui_0967 0.71 +1.1 993,372 - Dsui_0967 0.74 -0.5 993,380 + Dsui_0967 0.76 +0.6 993,405 - Dsui_0967 0.84 -0.7 993,695 - Dsui_0968 0.28 +0.7 993,789 - Dsui_0968 0.42 -0.3
Or see this region's nucleotide sequence