Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1409 and Dshi_1410 are separated by 12 nucleotides Dshi_1410 and Dshi_1411 are separated by 73 nucleotides Dshi_1411 and Dshi_1412 are separated by 38 nucleotides
Dshi_1409: Dshi_1409 - hypothetical protein (RefSeq), at 1,463,926 to 1,464,975
_1409
Dshi_1410: Dshi_1410 - protein of unknown function DUF442 (RefSeq), at 1,464,988 to 1,465,500
_1410
Dshi_1411: Dshi_1411 - transcriptional regulator, TraR/DksA family (RefSeq), at 1,465,574 to 1,465,852
_1411
Dshi_1412: Dshi_1412 - hypothetical protein (RefSeq), at 1,465,891 to 1,466,133
_1412
Position (kb)
1464
1465
1466 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1464.522 kb on - strand, within Dshi_1409 at 1464.561 kb on + strand, within Dshi_1409 at 1464.652 kb on + strand, within Dshi_1409 at 1464.735 kb on + strand, within Dshi_1409 at 1464.967 kb on + strand at 1465.189 kb on - strand, within Dshi_1410 at 1465.429 kb on - strand, within Dshi_1410 at 1465.500 kb on + strand at 1465.524 kb on - strand at 1465.656 kb on - strand, within Dshi_1411 at 1465.698 kb on + strand, within Dshi_1411 at 1465.717 kb on + strand, within Dshi_1411 at 1465.769 kb on + strand, within Dshi_1411 at 1465.841 kb on + strand at 1465.847 kb on + strand at 1465.855 kb on - strand at 1466.016 kb on + strand, within Dshi_1412 at 1466.135 kb on - strand at 1466.281 kb on - strand at 1466.360 kb on - strand at 1466.395 kb on + strand at 1466.470 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 1,464,522 - Dshi_1409 0.57 +0.6 1,464,561 + Dshi_1409 0.60 +0.3 1,464,652 + Dshi_1409 0.69 +1.3 1,464,735 + Dshi_1409 0.77 -1.6 1,464,967 + -2.3 1,465,189 - Dshi_1410 0.39 -2.7 1,465,429 - Dshi_1410 0.86 -2.7 1,465,500 + -0.4 1,465,524 - +2.6 1,465,656 - Dshi_1411 0.29 -0.9 1,465,698 + Dshi_1411 0.44 +1.9 1,465,717 + Dshi_1411 0.51 -1.3 1,465,769 + Dshi_1411 0.70 -0.9 1,465,841 + +0.2 1,465,847 + +1.3 1,465,855 - +1.9 1,466,016 + Dshi_1412 0.51 +0.6 1,466,135 - +0.3 1,466,281 - +1.6 1,466,360 - -0.3 1,466,395 + -3.6 1,466,470 + +0.3
Or see this region's nucleotide sequence