Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0744 and Psest_0745 are separated by 212 nucleotides Psest_0745 and Psest_0746 are separated by 49 nucleotides Psest_0746 and Psest_0747 overlap by 1 nucleotides
Psest_0744: Psest_0744 - Uncharacterized conserved protein, at 817,137 to 817,724
_0744
Psest_0745: Psest_0745 - Domain of Unknown Function (DUF326)., at 817,937 to 818,266
_0745
Psest_0746: Psest_0746 - Protein of unknown function (DUF1826)., at 818,316 to 818,960
_0746
Psest_0747: Psest_0747 - Putative GTPases (G3E family), at 818,960 to 820,162
_0747
Position (kb) 818
819 Strain fitness (log2 ratio) -1
0
1
2 at 817.584 kb on - strand, within Psest_0744 at 817.750 kb on + strand at 817.767 kb on - strand at 817.851 kb on - strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.854 kb on + strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.855 kb on - strand at 817.857 kb on + strand at 817.952 kb on + strand at 817.953 kb on - strand at 817.953 kb on - strand at 818.551 kb on + strand, within Psest_0746 at 818.551 kb on + strand, within Psest_0746 at 818.552 kb on - strand, within Psest_0746 at 818.552 kb on - strand, within Psest_0746 at 818.552 kb on - strand, within Psest_0746 at 818.568 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.583 kb on + strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.584 kb on - strand, within Psest_0746 at 818.898 kb on + strand at 818.898 kb on + strand at 818.898 kb on + strand at 818.899 kb on - strand at 818.899 kb on - strand at 818.899 kb on - strand at 819.222 kb on + strand, within Psest_0747 at 819.223 kb on - strand, within Psest_0747 at 819.223 kb on - strand, within Psest_0747 at 819.348 kb on + strand, within Psest_0747 at 819.348 kb on + strand, within Psest_0747 at 819.348 kb on + strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.349 kb on - strand, within Psest_0747 at 819.384 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747 at 819.405 kb on + strand, within Psest_0747
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 817,584 - Psest_0744 0.76 +0.2 817,750 + +0.8 817,767 - +2.1 817,851 - -0.8 817,854 + +1.5 817,854 + +1.6 817,854 + +1.1 817,854 + +0.7 817,854 + +0.6 817,854 + -0.5 817,854 + +1.9 817,854 + +1.0 817,854 + -0.5 817,854 + +0.2 817,854 + +0.2 817,854 + -0.0 817,855 - +0.7 817,855 - +0.1 817,855 - -0.2 817,855 - +0.8 817,855 - -0.1 817,855 - +0.4 817,855 - +0.6 817,855 - -0.1 817,855 - -0.1 817,855 - +0.2 817,855 - -0.7 817,855 - +0.0 817,857 + +0.6 817,952 + +0.2 817,953 - +0.3 817,953 - +0.3 818,551 + Psest_0746 0.36 +2.1 818,551 + Psest_0746 0.36 +0.7 818,552 - Psest_0746 0.37 +0.4 818,552 - Psest_0746 0.37 +0.1 818,552 - Psest_0746 0.37 +0.6 818,568 + Psest_0746 0.39 +0.9 818,583 + Psest_0746 0.41 +2.6 818,583 + Psest_0746 0.41 +0.3 818,583 + Psest_0746 0.41 +1.1 818,583 + Psest_0746 0.41 +0.2 818,583 + Psest_0746 0.41 +0.2 818,583 + Psest_0746 0.41 +1.1 818,584 - Psest_0746 0.42 +0.6 818,584 - Psest_0746 0.42 +0.4 818,584 - Psest_0746 0.42 +0.2 818,584 - Psest_0746 0.42 -1.3 818,584 - Psest_0746 0.42 +0.8 818,584 - Psest_0746 0.42 +1.4 818,584 - Psest_0746 0.42 -0.3 818,898 + +0.8 818,898 + +0.2 818,898 + +1.1 818,899 - +0.7 818,899 - -0.3 818,899 - +0.7 819,222 + Psest_0747 0.22 -1.0 819,223 - Psest_0747 0.22 -0.4 819,223 - Psest_0747 0.22 +1.1 819,348 + Psest_0747 0.32 -0.8 819,348 + Psest_0747 0.32 -0.8 819,348 + Psest_0747 0.32 +0.2 819,349 - Psest_0747 0.32 +0.6 819,349 - Psest_0747 0.32 -0.3 819,349 - Psest_0747 0.32 +0.1 819,349 - Psest_0747 0.32 +1.9 819,384 + Psest_0747 0.35 +0.9 819,405 + Psest_0747 0.37 +0.8 819,405 + Psest_0747 0.37 +0.1 819,405 + Psest_0747 0.37 +0.9 819,405 + Psest_0747 0.37 -0.4
Or see this region's nucleotide sequence