Experiment: 1-octen-3-ol 0.5427293333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03226 and SMc03227 are separated by 14 nucleotides SMc03227 and SMc03228 are separated by 6 nucleotides SMc03228 and SMc03229 are separated by 17 nucleotides
SMc03226: SMc03226 - hypothetical protein, at 3,335,825 to 3,336,481
SMc03226
SMc03227: SMc03227 - hypothetical protein, at 3,336,496 to 3,336,927
SMc03227
SMc03228: SMc03228 - YciI-like protein, at 3,336,934 to 3,337,227
SMc03228
SMc03229: SMc03229 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 3,337,245 to 3,338,246
SMc03229
Position (kb)
3336
3337 Strain fitness (log2 ratio)
-2
-1
0
1 at 3335.743 kb on + strand at 3335.768 kb on + strand at 3335.769 kb on - strand at 3335.769 kb on - strand at 3335.769 kb on - strand at 3335.769 kb on - strand at 3335.907 kb on + strand, within SMc03226 at 3335.908 kb on - strand, within SMc03226 at 3335.908 kb on - strand, within SMc03226 at 3335.943 kb on + strand, within SMc03226 at 3335.944 kb on - strand, within SMc03226 at 3336.037 kb on - strand, within SMc03226 at 3336.057 kb on + strand, within SMc03226 at 3336.057 kb on + strand, within SMc03226 at 3336.058 kb on - strand, within SMc03226 at 3336.089 kb on - strand, within SMc03226 at 3336.484 kb on + strand at 3336.484 kb on + strand at 3336.585 kb on + strand, within SMc03227 at 3336.773 kb on + strand, within SMc03227 at 3336.775 kb on + strand, within SMc03227 at 3336.828 kb on - strand, within SMc03227 at 3336.965 kb on + strand, within SMc03228 at 3336.965 kb on + strand, within SMc03228 at 3336.965 kb on + strand, within SMc03228 at 3336.966 kb on - strand, within SMc03228 at 3336.966 kb on - strand, within SMc03228 at 3336.966 kb on - strand, within SMc03228 at 3337.148 kb on + strand, within SMc03228
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.5427293333 mM remove 3,335,743 + +0.6 3,335,768 + +1.4 3,335,769 - +0.2 3,335,769 - +0.4 3,335,769 - +0.5 3,335,769 - +0.2 3,335,907 + SMc03226 0.12 -0.9 3,335,908 - SMc03226 0.13 +0.3 3,335,908 - SMc03226 0.13 +0.2 3,335,943 + SMc03226 0.18 -0.3 3,335,944 - SMc03226 0.18 +0.1 3,336,037 - SMc03226 0.32 -0.2 3,336,057 + SMc03226 0.35 -0.4 3,336,057 + SMc03226 0.35 +0.4 3,336,058 - SMc03226 0.35 -0.0 3,336,089 - SMc03226 0.40 +0.0 3,336,484 + -0.5 3,336,484 + +0.3 3,336,585 + SMc03227 0.21 -0.3 3,336,773 + SMc03227 0.64 -0.8 3,336,775 + SMc03227 0.65 -0.5 3,336,828 - SMc03227 0.77 -1.1 3,336,965 + SMc03228 0.11 -2.0 3,336,965 + SMc03228 0.11 -0.5 3,336,965 + SMc03228 0.11 +0.5 3,336,966 - SMc03228 0.11 -0.0 3,336,966 - SMc03228 0.11 -0.0 3,336,966 - SMc03228 0.11 -0.7 3,337,148 + SMc03228 0.73 -0.6
Or see this region's nucleotide sequence