Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4869

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
5,779,156	+		Psyr_4868	0.59	+1.5
5,779,156	+		Psyr_4868	0.59	-0.1
5,779,156	+		Psyr_4868	0.59	+1.4
5,779,156	+		Psyr_4868	0.59	-1.1
5,779,157	-		Psyr_4868	0.59	-0.3
5,779,157	-		Psyr_4868	0.59	-1.5
5,779,157	-		Psyr_4868	0.59	-0.5
5,779,322	+		Psyr_4868	0.71	+1.2
5,779,322	+		Psyr_4868	0.71	+0.2
5,779,322	+		Psyr_4868	0.71	+0.1
5,779,322	+		Psyr_4868	0.71	+0.9
5,779,322	+		Psyr_4868	0.71	+0.3
5,779,322	+		Psyr_4868	0.71	-0.3
5,779,322	+		Psyr_4868	0.71	-0.4
5,779,322	+		Psyr_4868	0.71	+0.2
5,779,322	+		Psyr_4868	0.71	-0.1
5,779,322	+		Psyr_4868	0.71	-1.3
5,779,323	-		Psyr_4868	0.71	-0.3
5,779,323	-		Psyr_4868	0.71	-0.4
5,779,323	-		Psyr_4868	0.71	+0.4
5,779,323	-		Psyr_4868	0.71	+0.2
5,779,323	-		Psyr_4868	0.71	-1.3
5,779,323	-		Psyr_4868	0.71	+0.1
5,779,323	-		Psyr_4868	0.71	-0.0
5,779,323	-		Psyr_4868	0.71	-0.8
5,779,323	-		Psyr_4868	0.71	+0.8
5,779,323	-		Psyr_4868	0.71	-2.1
5,779,323	-		Psyr_4868	0.71	+0.3
5,779,323	-		Psyr_4868	0.71	+1.1
5,779,323	-		Psyr_4868	0.71	-1.1
5,779,323	-		Psyr_4868	0.71	-1.3
5,779,323	-		Psyr_4868	0.71	+1.0
5,779,361	-		Psyr_4868	0.74	-0.7
5,779,401	+		Psyr_4868	0.77	+0.7
5,779,401	+		Psyr_4868	0.77	+0.6
5,779,401	+		Psyr_4868	0.77	+0.3
5,779,530	-		Psyr_4868	0.86	+1.9
5,779,610	+				-1.8
5,779,610	+				-1.7
5,779,610	+				+0.8
5,779,610	+				-1.0
5,779,610	+				-0.2
5,779,610	+				-0.3
5,779,611	-				+1.2
5,779,611	-				+0.6
5,779,611	-				+0.4
5,779,611	-				+0.6
5,779,611	-				+0.6
5,779,611	-				-2.2
5,779,611	-				+0.4
5,779,611	-				-1.3
5,779,611	-				+2.8
5,779,611	-				+0.3
5,779,611	-				-1.3
5,779,625	+				+0.3
5,779,625	+				-0.1
5,779,625	+				-0.1
5,779,625	+				+2.2
5,779,625	+				-0.9
5,779,625	+				-1.4
5,779,626	-				+0.6
5,779,648	+				-0.5
5,779,649	-				-0.2
5,779,649	-				-0.5
5,779,698	-				+0.9
5,779,706	+				-0.0
5,779,715	-				-0.4
5,779,843	+				-0.1
5,779,843	+				+2.5
5,779,843	+				-0.6
5,779,843	+				+0.9
5,779,844	-				+0.9
5,779,844	-				+1.4
5,779,929	+				-2.6
5,779,929	+				+0.2
5,779,929	+				-0.1
5,779,930	-				-0.1
5,779,930	-				+1.4
5,779,942	-				+0.2
5,779,959	+				-0.1
5,779,960	-				-3.3
5,779,960	-				-0.2
5,779,977	+				-0.1
5,779,978	-				+0.1
5,779,978	-				+0.1
5,779,986	+				+0.2
5,779,986	+				+0.4
5,779,987	-				+0.1
5,779,987	-				+0.0
5,780,065	+				-0.4
5,780,065	+				-0.5
5,780,065	+				-0.5
5,780,066	-				-0.3
5,780,066	-				+1.3
5,780,075	+				-0.8
5,780,075	+				+0.4
5,780,075	+				-0.1
5,780,075	+				-0.7
5,780,075	+				-2.4
5,780,076	-				+0.1
5,780,076	-				-0.2
5,780,076	-				-0.0
5,780,148	+				-1.4
5,780,148	+				-0.6
5,780,148	+				+0.8
5,780,148	+				+0.3
5,780,149	-				-0.4
5,780,149	-				+1.2
5,780,299	+		Psyr_4869	0.22	-0.4
5,780,300	-		Psyr_4869	0.22	+0.9
5,780,300	-		Psyr_4869	0.22	-0.2
5,780,300	-		Psyr_4869	0.22	-3.0
5,780,341	+		Psyr_4869	0.28	-0.4
5,780,497	+		Psyr_4869	0.51	-0.3
5,780,497	+		Psyr_4869	0.51	+0.0
5,780,497	+		Psyr_4869	0.51	+0.5
5,780,497	+		Psyr_4869	0.51	-0.7
5,780,497	+		Psyr_4869	0.51	-0.2
5,780,497	+		Psyr_4869	0.51	+0.5
5,780,497	+		Psyr_4869	0.51	-0.9
5,780,498	-		Psyr_4869	0.51	-0.7
5,780,498	-		Psyr_4869	0.51	-0.6
5,780,498	-		Psyr_4869	0.51	+1.1
5,780,498	-		Psyr_4869	0.51	-0.7
5,780,498	-		Psyr_4869	0.51	-0.1
5,780,498	-		Psyr_4869	0.51	-1.4
5,780,498	-		Psyr_4869	0.51	-1.4
5,780,498	-		Psyr_4869	0.51	+1.3
5,780,651	+		Psyr_4869	0.74	-1.5
5,780,651	+		Psyr_4869	0.74	-0.7
5,780,652	-		Psyr_4869	0.74	-0.1
5,780,657	+		Psyr_4869	0.75	+0.1
5,780,657	+		Psyr_4869	0.75	-1.6
5,780,657	+		Psyr_4869	0.75	+0.1
5,780,657	+		Psyr_4869	0.75	+0.1
5,780,657	+		Psyr_4869	0.75	-0.4
5,780,657	+		Psyr_4869	0.75	-0.8
5,780,658	-		Psyr_4869	0.75	-0.2
5,780,658	-		Psyr_4869	0.75	-0.0
5,780,658	-		Psyr_4869	0.75	-2.1
5,780,658	-		Psyr_4869	0.75	-1.1
5,780,658	-		Psyr_4869	0.75	+0.9
5,780,658	-		Psyr_4869	0.75	-0.2
5,780,658	-		Psyr_4869	0.75	-0.1
5,780,658	-		Psyr_4869	0.75	-1.0
5,780,692	+		Psyr_4869	0.80	-0.4
5,780,692	+		Psyr_4869	0.80	+0.2
5,780,692	+		Psyr_4869	0.80	-0.4
5,780,692	+		Psyr_4869	0.80	+0.6
5,780,693	-		Psyr_4869	0.80	-0.0
5,780,693	-		Psyr_4869	0.80	-0.4
5,780,693	-		Psyr_4869	0.80	+0.6
5,780,693	-		Psyr_4869	0.80	-0.4
5,780,767	+				-0.0
5,780,767	+				-0.2
5,780,767	+				-1.5
5,780,779	+				-1.1
5,780,779	+				+0.7
5,780,779	+				-0.7
5,780,779	+				+1.4
5,780,780	-				+0.6
5,780,780	-				-0.0
5,780,780	-				-0.7
5,780,857	-				+0.1
5,780,869	+				-0.4
5,780,870	-				+0.1
5,780,870	-				+0.3
5,780,873	+				-2.1
5,780,873	+				+0.5
5,780,874	-				-1.5
5,780,874	-				-0.5
5,780,899	+				+1.3
5,780,912	+				-1.2
5,780,930	-				+0.2
5,780,930	-				-0.1
5,780,950	+				-0.7
5,780,993	+		Psyr_4870	0.12	-0.6
5,780,994	-		Psyr_4870	0.13	-1.0
5,780,994	-		Psyr_4870	0.13	-0.8
5,781,010	+		Psyr_4870	0.14	-0.1
5,781,020	+		Psyr_4870	0.15	+0.5
5,781,032	+		Psyr_4870	0.16	-0.2
5,781,033	-		Psyr_4870	0.16	-0.4
5,781,049	+		Psyr_4870	0.18	-0.4
5,781,049	+		Psyr_4870	0.18	+0.1
5,781,050	-		Psyr_4870	0.18	+0.0
5,781,050	-		Psyr_4870	0.18	+0.7
5,781,050	-		Psyr_4870	0.18	+0.6
5,781,066	+		Psyr_4870	0.19	+0.2
5,781,142	+		Psyr_4870	0.26	-0.8
5,781,142	+		Psyr_4870	0.26	-0.6
5,781,142	+		Psyr_4870	0.26	+0.1
5,781,142	+		Psyr_4870	0.26	-2.0
5,781,142	+		Psyr_4870	0.26	-1.3
5,781,143	-		Psyr_4870	0.26	+1.1
5,781,143	-		Psyr_4870	0.26	-2.7
5,781,143	-		Psyr_4870	0.26	-2.0
5,781,143	-		Psyr_4870	0.26	-0.6
5,781,144	+		Psyr_4870	0.26	+1.2
5,781,144	+		Psyr_4870	0.26	-0.6
5,781,145	-		Psyr_4870	0.27	+1.1
5,781,145	-		Psyr_4870	0.27	-0.9
5,781,181	+		Psyr_4870	0.30	+0.5
5,781,187	+		Psyr_4870	0.30	-0.1
5,781,188	-		Psyr_4870	0.31	-1.2
5,781,336	-		Psyr_4870	0.44	+0.2
5,781,377	+		Psyr_4870	0.48	+1.7
5,781,378	-		Psyr_4870	0.48	-0.0
5,781,392	+		Psyr_4870	0.49	+0.5
5,781,401	-		Psyr_4870	0.50	-1.0
5,781,401	-		Psyr_4870	0.50	+0.2
5,781,402	+		Psyr_4870	0.50	+0.1
5,781,403	-		Psyr_4870	0.50	-1.0
5,781,403	-		Psyr_4870	0.50	-0.4
5,781,403	-		Psyr_4870	0.50	+0.8
5,781,460	-		Psyr_4870	0.56	+0.6
5,781,529	+		Psyr_4870	0.62	+0.5
5,781,531	+		Psyr_4870	0.62	+0.0
5,781,531	+		Psyr_4870	0.62	-0.2
5,781,531	+		Psyr_4870	0.62	-2.4
5,781,531	+		Psyr_4870	0.62	+0.1
5,781,531	+		Psyr_4870	0.62	+0.2
5,781,559	-		Psyr_4870	0.65	-0.6
5,781,559	-		Psyr_4870	0.65	-0.5
5,781,648	+		Psyr_4870	0.73	-2.0
5,781,649	-		Psyr_4870	0.73	+1.1
5,781,762	-		Psyr_4870	0.84	-0.9