Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4913

Experiment: DMSO

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO
5,824,270	+		Psyr_4911	0.85	+0.6
5,824,271	-		Psyr_4911	0.85	+1.1
5,824,271	-		Psyr_4911	0.85	+1.7
5,824,333	+				+0.5
5,824,333	+				-0.6
5,824,334	-				+0.1
5,824,334	-				+2.4
5,824,334	-				-1.6
5,824,334	-				-0.1
5,824,334	-				-0.2
5,824,541	+		Psyr_4912	0.18	-0.0
5,824,552	+		Psyr_4912	0.20	-1.0
5,824,721	-		Psyr_4912	0.42	+0.6
5,824,723	+		Psyr_4912	0.42	-0.2
5,824,724	-		Psyr_4912	0.42	+0.4
5,824,888	+		Psyr_4912	0.64	+0.0
5,824,888	+		Psyr_4912	0.64	+1.3
5,824,888	+		Psyr_4912	0.64	+0.3
5,824,888	+		Psyr_4912	0.64	+1.5
5,824,889	-		Psyr_4912	0.64	-0.3
5,824,889	-		Psyr_4912	0.64	+0.8
5,824,957	+		Psyr_4912	0.73	+0.2
5,824,957	+		Psyr_4912	0.73	+1.8
5,824,957	+		Psyr_4912	0.73	+0.8
5,824,957	+		Psyr_4912	0.73	+1.4
5,824,957	+		Psyr_4912	0.73	-0.6
5,824,957	+		Psyr_4912	0.73	+0.4
5,824,957	+		Psyr_4912	0.73	+1.5
5,824,957	+		Psyr_4912	0.73	+0.8
5,824,957	+		Psyr_4912	0.73	+0.4
5,824,957	+		Psyr_4912	0.73	+0.2
5,824,957	+		Psyr_4912	0.73	+0.4
5,824,957	+		Psyr_4912	0.73	+0.8
5,824,958	-		Psyr_4912	0.73	+0.3
5,824,958	-		Psyr_4912	0.73	+0.6
5,824,958	-		Psyr_4912	0.73	+0.9
5,824,958	-		Psyr_4912	0.73	-1.3
5,825,122	+				+1.3
5,825,122	+				+2.0
5,825,122	+				+0.1
5,825,122	+				-1.5
5,825,123	-				-0.3
5,825,123	-				+3.5
5,825,123	-				+0.9
5,825,123	-				+1.0
5,825,123	-				-0.2
5,825,123	-				+1.1
5,825,123	-				-0.5
5,825,123	-				-0.2
5,825,123	-				-0.6
5,825,123	-				+0.7
5,825,123	-				+1.4
5,825,143	+				-0.0
5,825,143	+				-0.3
5,825,143	+				+0.0
5,825,143	+				-0.2
5,825,143	+				+0.8
5,825,143	+				+0.1
5,825,143	+				-0.6
5,825,143	+				+0.1
5,825,144	-				+0.2
5,825,144	-				+0.7
5,825,144	-				+0.8
5,825,144	-				-0.4
5,825,144	-				-0.6
5,825,392	-		Psyr_4913	0.23	+0.5
5,825,392	-		Psyr_4913	0.23	-1.8
5,825,395	+		Psyr_4913	0.23	-1.9
5,825,395	+		Psyr_4913	0.23	+1.6
5,825,395	+		Psyr_4913	0.23	-0.6
5,825,395	+		Psyr_4913	0.23	-0.3
5,825,395	+		Psyr_4913	0.23	+0.5
5,825,396	-		Psyr_4913	0.23	+0.6
5,825,396	-		Psyr_4913	0.23	+1.4
5,825,396	-		Psyr_4913	0.23	+1.4
5,825,446	+		Psyr_4913	0.31	-1.4
5,825,446	+		Psyr_4913	0.31	+0.6
5,825,446	+		Psyr_4913	0.31	+0.4
5,825,821	+		Psyr_4913	0.84	-3.4
5,825,821	+		Psyr_4913	0.84	+0.2
5,825,821	+		Psyr_4913	0.84	-2.1
5,825,821	+		Psyr_4913	0.84	+1.2
5,825,821	+		Psyr_4913	0.84	+0.5
5,825,821	+		Psyr_4913	0.84	-0.1
5,825,821	+		Psyr_4913	0.84	+2.0
5,825,821	+		Psyr_4913	0.84	+0.0
5,825,822	-		Psyr_4913	0.85	+0.1
5,825,822	-		Psyr_4913	0.85	-0.2
5,825,822	-		Psyr_4913	0.85	-2.8
5,825,822	-		Psyr_4913	0.85	+0.1
5,825,822	-		Psyr_4913	0.85	+1.8
5,825,822	-		Psyr_4913	0.85	-0.8
5,825,822	-		Psyr_4913	0.85	+1.0
5,825,822	-		Psyr_4913	0.85	+0.4
5,825,822	-		Psyr_4913	0.85	-0.2
5,825,822	-		Psyr_4913	0.85	+1.2
5,825,822	-		Psyr_4913	0.85	+2.5
5,825,822	-		Psyr_4913	0.85	+0.4
5,825,842	+		Psyr_4913	0.88	-0.1
5,825,842	+		Psyr_4913	0.88	-0.1
5,825,842	+		Psyr_4913	0.88	-0.3
5,825,842	+		Psyr_4913	0.88	-0.0
5,825,842	+		Psyr_4913	0.88	-1.1
5,825,842	+		Psyr_4913	0.88	-0.1
5,825,842	+		Psyr_4913	0.88	-0.3
5,825,843	-		Psyr_4913	0.88	+0.7
5,825,843	-		Psyr_4913	0.88	+1.1
5,825,843	-		Psyr_4913	0.88	+0.7
5,825,843	-		Psyr_4913	0.88	+0.2
5,825,878	+				+0.9
5,825,878	+				+1.2
5,825,878	+				-1.4
5,825,878	+				+0.1
5,825,878	+				-0.5
5,825,878	+				+0.2
5,825,878	+				+0.1
5,825,878	+				-0.1
5,825,878	+				+0.3
5,825,878	+				+0.8
5,825,878	+				-0.1
5,825,878	+				-0.3
5,825,878	+				+0.3
5,825,878	+				-0.9
5,825,879	-				-1.4
5,825,879	-				-0.9
5,825,879	-				+2.0
5,825,879	-				+0.6
5,825,879	-				-0.8
5,825,879	-				+0.2
5,825,879	-				+0.2
5,825,879	-				+0.2
5,825,879	-				+1.4
5,825,879	-				+2.0
5,825,879	-				-0.4
5,826,090	+		Psyr_4914	0.24	+0.1
5,826,090	+		Psyr_4914	0.24	-0.7
5,826,090	+		Psyr_4914	0.24	-0.0
5,826,090	+		Psyr_4914	0.24	+1.0
5,826,090	+		Psyr_4914	0.24	-0.8
5,826,090	+		Psyr_4914	0.24	-0.3
5,826,090	+		Psyr_4914	0.24	-0.2
5,826,091	-		Psyr_4914	0.24	-0.7
5,826,091	-		Psyr_4914	0.24	+0.5
5,826,091	-		Psyr_4914	0.24	+0.3
5,826,091	-		Psyr_4914	0.24	+0.5
5,826,091	-		Psyr_4914	0.24	-1.2
5,826,091	-		Psyr_4914	0.24	+0.1
5,826,091	-		Psyr_4914	0.24	+1.6
5,826,091	-		Psyr_4914	0.24	+1.5
5,826,091	-		Psyr_4914	0.24	+1.1
5,826,091	-		Psyr_4914	0.24	+1.2
5,826,091	-		Psyr_4914	0.24	-0.9
5,826,141	+		Psyr_4914	0.31	+0.1
5,826,142	-		Psyr_4914	0.31	-0.3
5,826,142	-		Psyr_4914	0.31	+0.9
5,826,142	-		Psyr_4914	0.31	-0.7
5,826,144	+		Psyr_4914	0.32	+1.1
5,826,249	+		Psyr_4914	0.47	+0.4
5,826,249	+		Psyr_4914	0.47	+0.4
5,826,249	+		Psyr_4914	0.47	+0.3
5,826,249	+		Psyr_4914	0.47	+0.6
5,826,249	+		Psyr_4914	0.47	+1.0
5,826,249	+		Psyr_4914	0.47	+1.2
5,826,249	+		Psyr_4914	0.47	-1.1
5,826,250	-		Psyr_4914	0.47	+0.5
5,826,250	-		Psyr_4914	0.47	-0.2
5,826,250	-		Psyr_4914	0.47	-0.3
5,826,250	-		Psyr_4914	0.47	-0.2
5,826,250	-		Psyr_4914	0.47	-1.4
5,826,348	+		Psyr_4914	0.61	+1.0
5,826,348	+		Psyr_4914	0.61	+3.0
5,826,348	+		Psyr_4914	0.61	+0.2
5,826,348	+		Psyr_4914	0.61	-0.2
5,826,348	+		Psyr_4914	0.61	-0.6
5,826,348	+		Psyr_4914	0.61	+0.6
5,826,348	+		Psyr_4914	0.61	-0.4
5,826,348	+		Psyr_4914	0.61	+1.3
5,826,348	+		Psyr_4914	0.61	-0.8
5,826,348	+		Psyr_4914	0.61	+1.1
5,826,348	+		Psyr_4914	0.61	+1.4
5,826,348	+		Psyr_4914	0.61	+0.5
5,826,348	+		Psyr_4914	0.61	-2.9
5,826,348	+		Psyr_4914	0.61	+0.8
5,826,349	-		Psyr_4914	0.61	-0.4
5,826,349	-		Psyr_4914	0.61	-1.8
5,826,349	-		Psyr_4914	0.61	-0.8
5,826,349	-		Psyr_4914	0.61	+1.3
5,826,349	-		Psyr_4914	0.61	+0.6
5,826,349	-		Psyr_4914	0.61	+0.4
5,826,349	-		Psyr_4914	0.61	+1.0
5,826,349	-		Psyr_4914	0.61	+0.1
5,826,349	-		Psyr_4914	0.61	-1.0
5,826,349	-		Psyr_4914	0.61	+0.8
5,826,349	-		Psyr_4914	0.61	+0.4
5,826,351	-		Psyr_4914	0.62	-0.6
5,826,390	+		Psyr_4914	0.67	+0.2
5,826,492	+		Psyr_4914	0.82	+0.2
5,826,492	+		Psyr_4914	0.82	-0.3
5,826,492	+		Psyr_4914	0.82	-0.4
5,826,493	-		Psyr_4914	0.82	+0.2
5,826,531	+		Psyr_4914	0.88	-0.4
5,826,531	+		Psyr_4914	0.88	-0.4
5,826,531	+		Psyr_4914	0.88	+1.1
5,826,531	+		Psyr_4914	0.88	+0.5
5,826,532	-		Psyr_4914	0.88	+1.4
5,826,583	+				-0.4
5,826,583	+				+0.5
5,826,584	-				-0.9
5,826,592	+				-0.2
5,826,592	+				+2.7
5,826,615	+				-0.2
5,826,616	-				-0.6
5,826,616	-				+0.9
5,826,656	-				+0.4
5,826,656	-				+0.3
5,826,656	-				-0.2
5,826,656	-				-0.9
5,826,805	+		Psyr_4915	0.15	+0.0