Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1420

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
1,604,299	+				-0.8
1,604,301	+				-0.9
1,604,301	+				-0.5
1,604,816	+				-0.6
1,604,820	+				-0.3
1,604,820	+				+0.7
1,604,824	+				-0.1
1,604,866	+				+0.5
1,604,921	+				-0.1
1,604,944	+				-0.3
1,604,944	+				+0.3
1,604,944	+				+2.9
1,604,944	+				+0.3
1,604,944	+				+1.0
1,604,944	+				+0.7
1,604,944	+				+0.1
1,604,945	-				+0.3
1,604,945	-				+0.2
1,604,945	-				+0.6
1,604,945	-				+0.7
1,604,945	-				+1.3
1,604,945	-				-0.5
1,604,945	-				-1.0
1,604,945	-				-0.0
1,604,945	-				+0.2
1,604,945	-				+0.3
1,604,993	+				+0.0
1,604,993	+				-0.8
1,605,010	+				-0.3
1,605,010	+				+1.0
1,605,011	-				-0.6
1,605,019	+				+0.2
1,605,019	+				+0.3
1,605,019	+				-0.0
1,605,019	+				-1.1
1,605,019	+				-0.1
1,605,019	+				+0.1
1,605,019	+				-1.1
1,605,019	+				-0.8
1,605,019	+				+1.9
1,605,019	+				+0.7
1,605,020	-				+1.1
1,605,020	-				+0.2
1,605,020	-				+0.5
1,605,020	-				-0.1
1,605,020	-				+0.6
1,605,020	-				-0.4
1,605,020	-				+0.8
1,605,020	-				+0.7
1,605,020	-				-0.8
1,605,021	+				-1.6
1,605,021	+				-0.3
1,605,021	+				-0.3
1,605,021	+				+0.5
1,605,021	+				+0.1
1,605,021	+				+0.8
1,605,021	+				-0.8
1,605,022	-				-0.8
1,605,022	-				+0.7
1,605,022	-				-0.2
1,605,022	-				-0.3
1,605,022	-				-0.9
1,605,054	+				-0.3
1,605,082	+				+0.3
1,605,082	+				-0.9
1,605,091	+				+2.3
1,605,091	+				-0.3
1,605,091	+				+0.8
1,605,091	+				+0.3
1,605,092	-				+1.4
1,605,092	-				-0.6
1,605,109	+				+0.2
1,605,109	+				-0.3
1,605,109	+				+0.3
1,605,109	+				+0.4
1,605,109	+				+0.5
1,605,178	+				-0.4
1,605,178	+				+0.1
1,605,178	+				-1.7
1,605,179	-				-0.8
1,605,199	+				+0.2
1,605,199	+				+0.2
1,605,199	+				-0.4
1,605,199	+				-1.9
1,605,199	+				-0.4
1,605,236	-				-0.3
1,605,248	+				-0.1
1,605,248	+				+0.7
1,605,248	+				-0.4
1,605,253	+				+0.4
1,605,253	+				-1.3
1,605,253	+				-0.9
1,605,253	+				+0.2
1,605,253	+				+0.4
1,605,253	+				-0.3
1,605,253	+				-0.7
1,605,253	+				-0.6
1,605,253	+				-0.1
1,605,253	+				+0.9
1,605,253	+				-0.3
1,605,253	+				-0.3
1,605,253	+				-0.5
1,605,253	+				-0.3
1,605,253	+				-0.4
1,605,253	+				-0.3
1,605,253	+				-1.0
1,605,253	+				+0.5
1,605,253	+				-1.7
1,605,253	+				-0.3
1,605,253	+				-0.2
1,605,253	+				+0.2
1,605,253	+				+1.9
1,605,253	+				-0.7
1,605,253	+				-0.3
1,605,253	+				-0.8
1,605,254	-				-0.3
1,605,254	-				-0.3
1,605,254	-				-0.4
1,605,254	-				-1.2
1,605,254	-				+0.0
1,605,254	-				+0.3
1,605,254	-				+0.9
1,605,254	-				+0.3
1,605,254	-				-0.7
1,605,254	-				-1.2
1,605,254	-				+1.3
1,605,254	-				-0.4
1,605,254	-				-0.3
1,605,254	-				+0.7
1,605,254	-				+0.9
1,605,254	-				+0.1
1,605,254	-				-0.3
1,605,254	-				+0.7
1,605,254	-				-1.0
1,605,254	-				-0.8
1,605,254	-				-1.0
1,605,254	-				+0.7
1,605,361	-				+1.3
1,605,377	+				-0.3
1,605,378	-				+0.3
1,605,378	-				+0.1
1,605,378	-				-0.3
1,605,381	+				+0.9
1,605,381	+				-0.4
1,605,381	+				-0.7
1,605,381	+				+0.4
1,605,381	+				+0.5
1,605,382	-				-0.5
1,605,382	-				+0.7
1,605,382	-				-0.1
1,605,382	-				-0.3
1,605,382	-				-0.6
1,605,412	+				+0.1
1,605,412	+				+0.7
1,605,470	+				+1.1
1,605,471	-				+1.3
1,605,496	-		Psyr_1420	0.11	-0.4
1,605,496	-		Psyr_1420	0.11	-0.7
1,605,531	+		Psyr_1420	0.12	-1.7
1,605,531	+		Psyr_1420	0.12	+1.3
1,605,531	+		Psyr_1420	0.12	-0.6
1,605,531	+		Psyr_1420	0.12	+1.0
1,605,531	+		Psyr_1420	0.12	-0.3
1,605,531	+		Psyr_1420	0.12	+0.4
1,605,531	+		Psyr_1420	0.12	+0.7
1,605,531	+		Psyr_1420	0.12	+1.6
1,605,531	+		Psyr_1420	0.12	-0.6
1,605,531	+		Psyr_1420	0.12	+0.7
1,605,532	-		Psyr_1420	0.12	+1.3
1,605,532	-		Psyr_1420	0.12	-0.5
1,605,532	-		Psyr_1420	0.12	-0.3
1,605,532	-		Psyr_1420	0.12	+1.3
1,605,532	-		Psyr_1420	0.12	+1.3
1,605,532	-		Psyr_1420	0.12	-0.4
1,605,532	-		Psyr_1420	0.12	-0.3
1,605,532	-		Psyr_1420	0.12	+0.9
1,605,532	-		Psyr_1420	0.12	+0.2
1,605,532	-		Psyr_1420	0.12	-0.8
1,605,532	-		Psyr_1420	0.12	-0.5
1,605,532	-		Psyr_1420	0.12	-1.5
1,605,532	-		Psyr_1420	0.12	+0.3
1,605,532	-		Psyr_1420	0.12	-2.0
1,605,532	-		Psyr_1420	0.12	-0.7
1,605,532	-		Psyr_1420	0.12	+3.7
1,605,532	-		Psyr_1420	0.12	+1.3
1,605,532	-		Psyr_1420	0.12	+1.0
1,605,532	-		Psyr_1420	0.12	+0.2
1,605,532	-		Psyr_1420	0.12	-0.3
1,605,532	-		Psyr_1420	0.12	+0.0
1,605,532	-		Psyr_1420	0.12	+1.3
1,605,532	-		Psyr_1420	0.12	+0.3
1,605,532	-		Psyr_1420	0.12	+1.1
1,605,540	-		Psyr_1420	0.12	+0.0
1,605,540	-		Psyr_1420	0.12	+0.5
1,605,540	-		Psyr_1420	0.12	+0.9
1,605,542	-		Psyr_1420	0.12	+1.3
1,605,585	-		Psyr_1420	0.14	-1.2
1,605,600	-		Psyr_1420	0.15	+0.1
1,605,633	-		Psyr_1420	0.16	-0.5
1,605,646	+		Psyr_1420	0.16	+0.1
1,605,647	-		Psyr_1420	0.16	+1.3
1,605,665	+		Psyr_1420	0.17	+0.4
1,605,665	+		Psyr_1420	0.17	+0.1
1,605,665	+		Psyr_1420	0.17	+2.3
1,605,666	-		Psyr_1420	0.17	+0.5
1,605,714	+		Psyr_1420	0.19	+0.0
1,605,715	-		Psyr_1420	0.19	-1.9
1,605,742	+		Psyr_1420	0.20	+0.5
1,605,742	+		Psyr_1420	0.20	+0.1
1,605,743	-		Psyr_1420	0.20	-0.2
1,605,743	-		Psyr_1420	0.20	+0.1
1,605,954	+		Psyr_1420	0.28	+0.1
1,605,954	+		Psyr_1420	0.28	-0.4
1,605,955	-		Psyr_1420	0.28	+0.6
1,605,955	-		Psyr_1420	0.28	-0.5
1,606,051	+		Psyr_1420	0.32	+0.3
1,606,051	+		Psyr_1420	0.32	+0.5
1,606,051	+		Psyr_1420	0.32	-0.7
1,606,051	+		Psyr_1420	0.32	-0.0
1,606,052	-		Psyr_1420	0.32	+1.3
1,606,052	-		Psyr_1420	0.32	-1.7
1,606,052	-		Psyr_1420	0.32	-1.0
1,606,052	-		Psyr_1420	0.32	+0.1
1,606,052	-		Psyr_1420	0.32	+0.6
1,606,052	-		Psyr_1420	0.32	+0.9
1,606,052	-		Psyr_1420	0.32	-0.3
1,606,052	-		Psyr_1420	0.32	+1.3
1,606,064	+		Psyr_1420	0.32	+0.6
1,606,064	+		Psyr_1420	0.32	-0.0
1,606,064	+		Psyr_1420	0.32	-0.7
1,606,064	+		Psyr_1420	0.32	-1.1
1,606,065	-		Psyr_1420	0.32	-1.5
1,606,065	-		Psyr_1420	0.32	+0.1
1,606,065	-		Psyr_1420	0.32	+0.0
1,606,065	-		Psyr_1420	0.32	+0.3
1,606,108	+		Psyr_1420	0.34	-0.2
1,606,108	+		Psyr_1420	0.34	+0.1
1,606,108	+		Psyr_1420	0.34	+0.1
1,606,109	-		Psyr_1420	0.34	+0.6
1,606,109	-		Psyr_1420	0.34	-0.3
1,606,109	-		Psyr_1420	0.34	+0.2
1,606,109	-		Psyr_1420	0.34	+1.3
1,606,109	-		Psyr_1420	0.34	-0.6
1,606,109	-		Psyr_1420	0.34	+0.1
1,606,109	-		Psyr_1420	0.34	+1.3
1,606,259	-		Psyr_1420	0.40	+0.7
1,606,302	+		Psyr_1420	0.41	-0.3
1,606,302	+		Psyr_1420	0.41	+0.1
1,606,305	+		Psyr_1420	0.42	-0.5
1,606,305	+		Psyr_1420	0.42	+0.5
1,606,306	-		Psyr_1420	0.42	-1.0
1,606,306	-		Psyr_1420	0.42	-0.7
1,606,306	-		Psyr_1420	0.42	-0.5
1,606,306	-		Psyr_1420	0.42	+0.5
1,606,437	+		Psyr_1420	0.47	+0.1
1,606,457	+		Psyr_1420	0.47	+0.3
1,606,457	+		Psyr_1420	0.47	-0.2
1,606,481	+		Psyr_1420	0.48	-0.3
1,606,481	+		Psyr_1420	0.48	+0.8
1,606,481	+		Psyr_1420	0.48	-0.1
1,606,482	-		Psyr_1420	0.48	+0.7
1,606,482	-		Psyr_1420	0.48	-0.3
1,606,499	+		Psyr_1420	0.49	-1.3
1,606,500	-		Psyr_1420	0.49	+0.7
1,606,500	-		Psyr_1420	0.49	+1.3
1,606,500	-		Psyr_1420	0.49	+1.4
1,606,500	-		Psyr_1420	0.49	-1.5
1,606,500	-		Psyr_1420	0.49	-0.6
1,606,500	-		Psyr_1420	0.49	+0.5
1,606,500	-		Psyr_1420	0.49	-0.6
1,606,505	+		Psyr_1420	0.49	+0.1
1,606,505	+		Psyr_1420	0.49	+1.7
1,606,505	+		Psyr_1420	0.49	+0.2
1,606,506	-		Psyr_1420	0.49	-2.7
1,606,514	+		Psyr_1420	0.50	+0.1
1,606,514	+		Psyr_1420	0.50	-0.3
1,606,514	+		Psyr_1420	0.50	-2.3
1,606,514	+		Psyr_1420	0.50	-0.0
1,606,514	+		Psyr_1420	0.50	+0.3
1,606,515	-		Psyr_1420	0.50	-0.8
1,606,524	+		Psyr_1420	0.50	-1.2
1,606,524	+		Psyr_1420	0.50	-0.3
1,606,535	+		Psyr_1420	0.50	+0.0
1,606,536	-		Psyr_1420	0.50	-0.7
1,606,536	-		Psyr_1420	0.50	+0.9
1,606,536	-		Psyr_1420	0.50	+0.2
1,606,545	-		Psyr_1420	0.51	+0.1
1,606,607	+		Psyr_1420	0.53	+1.1
1,606,607	+		Psyr_1420	0.53	+1.1
1,606,607	+		Psyr_1420	0.53	-0.7
1,606,607	+		Psyr_1420	0.53	+0.7
1,606,607	+		Psyr_1420	0.53	-0.0
1,606,608	-		Psyr_1420	0.53	-0.6
1,606,608	-		Psyr_1420	0.53	-1.8
1,606,671	+		Psyr_1420	0.56	-0.2
1,606,671	+		Psyr_1420	0.56	-0.0
1,606,672	-		Psyr_1420	0.56	-1.1
1,606,672	-		Psyr_1420	0.56	-0.0
1,606,672	-		Psyr_1420	0.56	-0.8
1,606,672	-		Psyr_1420	0.56	+0.8
1,606,672	-		Psyr_1420	0.56	+0.2
1,606,672	-		Psyr_1420	0.56	-0.9
1,606,672	-		Psyr_1420	0.56	-0.0
1,606,672	-		Psyr_1420	0.56	-1.3
1,606,672	-		Psyr_1420	0.56	+0.8
1,606,876	+		Psyr_1420	0.63	+0.9
1,606,877	-		Psyr_1420	0.63	+0.0
1,606,906	+		Psyr_1420	0.64	-0.5
1,606,906	+		Psyr_1420	0.64	+0.6
1,606,906	+		Psyr_1420	0.64	-0.8
1,606,907	-		Psyr_1420	0.64	+0.7
1,606,907	-		Psyr_1420	0.64	+0.1
1,606,907	-		Psyr_1420	0.64	+0.3
1,606,907	-		Psyr_1420	0.64	-0.4
1,606,907	-		Psyr_1420	0.64	-0.2
1,606,907	-		Psyr_1420	0.64	+0.2
1,606,965	-		Psyr_1420	0.67	-0.1
1,606,967	-		Psyr_1420	0.67	+0.7
1,607,051	+		Psyr_1420	0.70	-0.4
1,607,051	+		Psyr_1420	0.70	+1.0
1,607,051	+		Psyr_1420	0.70	+0.3
1,607,051	+		Psyr_1420	0.70	+0.4
1,607,052	-		Psyr_1420	0.70	-2.7
1,607,052	-		Psyr_1420	0.70	+0.5
1,607,052	-		Psyr_1420	0.70	+2.0
1,607,052	-		Psyr_1420	0.70	+0.1
1,607,052	-		Psyr_1420	0.70	+0.4
1,607,080	+		Psyr_1420	0.71	+0.4
1,607,091	-		Psyr_1420	0.72	-0.9
1,607,176	-		Psyr_1420	0.75	+1.1
1,607,223	+		Psyr_1420	0.77	-1.0
1,607,223	+		Psyr_1420	0.77	+1.3
1,607,223	+		Psyr_1420	0.77	+1.0
1,607,223	+		Psyr_1420	0.77	-0.6
1,607,224	-		Psyr_1420	0.77	+0.3
1,607,224	-		Psyr_1420	0.77	+0.7
1,607,224	-		Psyr_1420	0.77	+0.8
1,607,225	+		Psyr_1420	0.77	-2.4
1,607,225	+		Psyr_1420	0.77	-0.6
1,607,225	+		Psyr_1420	0.77	+0.1
1,607,226	-		Psyr_1420	0.77	-0.3
1,607,226	-		Psyr_1420	0.77	-0.4
1,607,255	+		Psyr_1420	0.78	+0.6
1,607,255	+		Psyr_1420	0.78	+0.5
1,607,255	+		Psyr_1420	0.78	+0.0
1,607,255	+		Psyr_1420	0.78	-0.3
1,607,256	-		Psyr_1420	0.78	+0.6
1,607,256	-		Psyr_1420	0.78	+0.1
1,607,256	-		Psyr_1420	0.78	-1.7
1,607,277	+		Psyr_1420	0.79	-1.5
1,607,277	+		Psyr_1420	0.79	-0.3
1,607,277	+		Psyr_1420	0.79	+0.3
1,607,277	+		Psyr_1420	0.79	-1.3
1,607,277	+		Psyr_1420	0.79	-0.5
1,607,277	+		Psyr_1420	0.79	+0.3
1,607,277	+		Psyr_1420	0.79	+0.7
1,607,277	+		Psyr_1420	0.79	+2.3
1,607,277	+		Psyr_1420	0.79	-0.5
1,607,277	+		Psyr_1420	0.79	-0.6
1,607,277	+		Psyr_1420	0.79	+0.1
1,607,277	+		Psyr_1420	0.79	-0.3
1,607,277	+		Psyr_1420	0.79	+1.3
1,607,277	+		Psyr_1420	0.79	-1.0
1,607,277	+		Psyr_1420	0.79	+0.2
1,607,278	-		Psyr_1420	0.79	-0.7
1,607,278	-		Psyr_1420	0.79	+0.1
1,607,278	-		Psyr_1420	0.79	+0.4
1,607,278	-		Psyr_1420	0.79	-0.2
1,607,278	-		Psyr_1420	0.79	-0.3
1,607,278	-		Psyr_1420	0.79	-0.2
1,607,278	-		Psyr_1420	0.79	-0.7
1,607,278	-		Psyr_1420	0.79	+0.3
1,607,278	-		Psyr_1420	0.79	-0.1
1,607,278	-		Psyr_1420	0.79	+0.3
1,607,278	-		Psyr_1420	0.79	-0.3
1,607,278	-		Psyr_1420	0.79	+2.3
1,607,278	-		Psyr_1420	0.79	+0.2
1,607,278	-		Psyr_1420	0.79	+1.2
1,607,278	-		Psyr_1420	0.79	+0.5
1,607,278	-		Psyr_1420	0.79	-1.2
1,607,278	-		Psyr_1420	0.79	-0.3
1,607,353	+		Psyr_1420	0.81	-1.3
1,607,419	+		Psyr_1420	0.84	-0.5
1,607,419	+		Psyr_1420	0.84	+0.3
1,607,420	-		Psyr_1420	0.84	+1.3
1,607,420	-		Psyr_1420	0.84	-0.3
1,607,420	-		Psyr_1420	0.84	+1.1
1,607,420	-		Psyr_1420	0.84	+0.4
1,607,420	-		Psyr_1420	0.84	-0.0
1,607,420	-		Psyr_1420	0.84	+0.7
1,607,511	+		Psyr_1420	0.88	+0.1
1,607,512	-		Psyr_1420	0.88	+1.1
1,607,589	+				-0.9
1,607,595	+				+0.3
1,607,595	+				+1.4
1,607,595	+				-0.1
1,607,595	+				-0.3
1,607,596	-				-1.0
1,607,596	-				-0.3
1,607,596	-				-0.1
1,607,596	-				-2.0
1,607,596	-				+0.1
1,607,596	-				+0.3
1,607,596	-				+0.8
1,607,596	-				+0.6
1,607,596	-				-0.9
1,607,596	-				+0.1
1,607,596	-				+0.9
1,607,601	+				-0.4
1,607,602	-				-0.1
1,607,602	-				+0.0
1,607,602	-				-0.9
1,607,664	-				+0.7
1,607,684	+				-0.5
1,607,684	+				-0.1
1,607,684	+				-0.8
1,607,685	-				-0.3
1,607,685	-				+0.1
1,607,685	-				+0.1
1,607,685	-				+0.6
1,607,826	-				-0.2
1,607,901	-				+0.5
1,607,940	+				+0.6
1,607,941	-				-0.9
1,607,944	+				-0.2
1,607,944	+				-0.3
1,607,945	-				-0.2
1,607,945	-				-0.1
1,607,955	+				+0.1
1,607,955	+				+1.3
1,607,955	+				-0.2
1,607,955	+				+0.6
1,607,956	-				+0.6
1,607,956	-				+0.6
1,607,956	-				-1.5
1,607,959	+				-1.8
1,607,959	+				-0.2
1,607,959	+				-2.7
1,607,960	-				+1.6
1,607,960	-				-3.3
1,607,960	-				-0.2
1,607,960	-				+0.5
1,607,960	-				-0.7
1,607,960	-				+0.4
1,607,960	-				+0.5
1,608,016	-				+0.1
1,608,016	-				+1.0
1,608,146	+		Psyr_1421	0.13	+0.3
1,608,146	+		Psyr_1421	0.13	+0.3
1,608,146	+		Psyr_1421	0.13	-1.5
1,608,269	+		Psyr_1421	0.22	+0.7
1,608,269	+		Psyr_1421	0.22	+1.3
1,608,270	-		Psyr_1421	0.22	+2.1
1,608,270	-		Psyr_1421	0.22	+0.0
1,608,424	+		Psyr_1421	0.33	-1.0
1,608,424	+		Psyr_1421	0.33	-0.3
1,608,424	+		Psyr_1421	0.33	+0.2
1,608,424	+		Psyr_1421	0.33	-0.0
1,608,424	+		Psyr_1421	0.33	-1.6
1,608,762	-		Psyr_1421	0.57	-0.7
1,608,772	-		Psyr_1421	0.57	+2.2