Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00910 and PS417_00915 are separated by 188 nucleotides PS417_00915 and PS417_00920 are separated by 166 nucleotides
PS417_00910: PS417_00910 - diguanylate cyclase, at 203,482 to 204,483
_00910
PS417_00915: PS417_00915 - aminotransferase, at 204,672 to 205,856
_00915
PS417_00920: PS417_00920 - diguanylate cyclase, at 206,023 to 207,936
_00920
Position (kb) 204
205
206 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 203.787 kb on + strand, within PS417_00910 at 204.071 kb on + strand, within PS417_00910 at 204.071 kb on + strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.179 kb on + strand, within PS417_00910 at 204.180 kb on - strand, within PS417_00910 at 204.266 kb on + strand, within PS417_00910 at 204.281 kb on + strand, within PS417_00910 at 204.281 kb on + strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.531 kb on - strand at 204.573 kb on + strand at 204.597 kb on - strand at 204.640 kb on + strand at 204.697 kb on + strand at 204.786 kb on - strand at 205.395 kb on - strand, within PS417_00915 at 205.468 kb on + strand, within PS417_00915 at 205.712 kb on + strand, within PS417_00915 at 205.751 kb on - strand at 205.762 kb on + strand at 205.763 kb on - strand at 205.849 kb on + strand at 205.849 kb on + strand at 205.850 kb on - strand at 205.850 kb on - strand at 205.856 kb on + strand at 205.856 kb on + strand at 205.863 kb on + strand at 205.864 kb on - strand at 205.962 kb on - strand at 205.966 kb on + strand at 205.966 kb on + strand at 205.967 kb on - strand at 205.967 kb on - strand at 205.969 kb on - strand at 206.022 kb on + strand at 206.023 kb on - strand at 206.048 kb on + strand at 206.064 kb on - strand at 206.064 kb on - strand at 206.064 kb on - strand at 206.064 kb on - strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.109 kb on - strand at 206.109 kb on - strand at 206.167 kb on + strand at 206.584 kb on + strand, within PS417_00920
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 203,787 + PS417_00910 0.30 -0.8 204,071 + PS417_00910 0.59 -0.1 204,071 + PS417_00910 0.59 +0.2 204,072 - PS417_00910 0.59 +1.1 204,072 - PS417_00910 0.59 +0.5 204,072 - PS417_00910 0.59 +1.4 204,179 + PS417_00910 0.70 +1.9 204,180 - PS417_00910 0.70 +0.2 204,266 + PS417_00910 0.78 +0.3 204,281 + PS417_00910 0.80 +0.4 204,281 + PS417_00910 0.80 +0.9 204,282 - PS417_00910 0.80 -1.8 204,282 - PS417_00910 0.80 +0.4 204,282 - PS417_00910 0.80 +1.2 204,531 - -0.8 204,573 + +2.7 204,597 - -2.4 204,640 + -1.1 204,697 + -2.7 204,786 - +1.5 205,395 - PS417_00915 0.61 -0.4 205,468 + PS417_00915 0.67 -0.2 205,712 + PS417_00915 0.88 -0.3 205,751 - -1.3 205,762 + +1.1 205,763 - -1.3 205,849 + -0.3 205,849 + +0.5 205,850 - +0.2 205,850 - -0.8 205,856 + -0.7 205,856 + +3.7 205,863 + -1.7 205,864 - -1.8 205,962 - +0.1 205,966 + +2.4 205,966 + -2.5 205,967 - +1.7 205,967 - -0.5 205,969 - -1.2 206,022 + -0.1 206,023 - +1.0 206,048 + +1.7 206,064 - +1.3 206,064 - +0.5 206,064 - +2.7 206,064 - -0.0 206,065 + +0.2 206,065 + -1.2 206,065 + -0.6 206,065 + -1.3 206,065 + +0.0 206,066 - +1.2 206,066 - +1.4 206,066 - -1.1 206,066 - -0.3 206,109 - +1.3 206,109 - +4.1 206,167 + +0.2 206,584 + PS417_00920 0.29 -1.2
Or see this region's nucleotide sequence