Experiment: Aluminum chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3982 and Psest_3983 are separated by 31 nucleotides Psest_3983 and Psest_3984 are separated by 366 nucleotides
Psest_3982: Psest_3982 - hypothetical protein, at 4,149,337 to 4,150,647
_3982
Psest_3983: Psest_3983 - Aldo/keto reductases, related to diketogulonate reductase, at 4,150,679 to 4,151,596
_3983
Psest_3984: Psest_3984 - Methyl-accepting chemotaxis protein, at 4,151,963 to 4,153,984
_3984
Position (kb)
4150
4151
4152 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4149.888 kb on + strand, within Psest_3982 at 4149.889 kb on - strand, within Psest_3982 at 4149.936 kb on - strand, within Psest_3982 at 4150.058 kb on + strand, within Psest_3982 at 4150.058 kb on + strand, within Psest_3982 at 4150.058 kb on + strand, within Psest_3982 at 4150.059 kb on - strand, within Psest_3982 at 4150.059 kb on - strand, within Psest_3982 at 4150.059 kb on - strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.274 kb on + strand, within Psest_3982 at 4150.275 kb on - strand, within Psest_3982 at 4150.275 kb on - strand, within Psest_3982 at 4150.275 kb on - strand, within Psest_3982 at 4150.292 kb on + strand, within Psest_3982 at 4150.292 kb on + strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.293 kb on - strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.391 kb on + strand, within Psest_3982 at 4150.392 kb on - strand, within Psest_3982 at 4150.392 kb on - strand, within Psest_3982 at 4150.392 kb on - strand, within Psest_3982 at 4150.392 kb on - strand, within Psest_3982 at 4150.392 kb on - strand, within Psest_3982 at 4150.761 kb on + strand at 4150.761 kb on + strand at 4150.761 kb on + strand at 4150.761 kb on + strand at 4150.762 kb on - strand at 4150.762 kb on - strand at 4151.001 kb on + strand, within Psest_3983 at 4151.001 kb on + strand, within Psest_3983 at 4151.001 kb on + strand, within Psest_3983 at 4151.073 kb on + strand, within Psest_3983 at 4151.073 kb on + strand, within Psest_3983 at 4151.073 kb on + strand, within Psest_3983 at 4151.073 kb on + strand, within Psest_3983 at 4151.091 kb on + strand, within Psest_3983 at 4151.091 kb on + strand, within Psest_3983 at 4151.091 kb on + strand, within Psest_3983 at 4151.091 kb on + strand, within Psest_3983 at 4151.324 kb on - strand, within Psest_3983 at 4151.328 kb on + strand, within Psest_3983 at 4151.483 kb on - strand, within Psest_3983 at 4151.592 kb on + strand at 4151.592 kb on + strand at 4151.592 kb on + strand at 4151.593 kb on - strand at 4151.610 kb on + strand at 4151.611 kb on - strand at 4151.652 kb on + strand at 4151.783 kb on + strand at 4151.783 kb on + strand at 4151.792 kb on + strand at 4151.905 kb on - strand at 4151.905 kb on - strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.080 kb on + strand at 4152.081 kb on - strand at 4152.081 kb on - strand at 4152.081 kb on - strand at 4152.083 kb on - strand at 4152.162 kb on + strand at 4152.163 kb on - strand at 4152.163 kb on - strand at 4152.213 kb on - strand, within Psest_3984 at 4152.249 kb on + strand, within Psest_3984 at 4152.249 kb on + strand, within Psest_3984 at 4152.250 kb on - strand, within Psest_3984 at 4152.250 kb on - strand, within Psest_3984 at 4152.250 kb on - strand, within Psest_3984 at 4152.482 kb on + strand, within Psest_3984 at 4152.579 kb on - strand, within Psest_3984
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.3 mM remove 4,149,888 + Psest_3982 0.42 -0.3 4,149,889 - Psest_3982 0.42 +1.3 4,149,936 - Psest_3982 0.46 -0.6 4,150,058 + Psest_3982 0.55 -0.7 4,150,058 + Psest_3982 0.55 +0.3 4,150,058 + Psest_3982 0.55 +0.2 4,150,059 - Psest_3982 0.55 -1.8 4,150,059 - Psest_3982 0.55 -1.2 4,150,059 - Psest_3982 0.55 +2.6 4,150,274 + Psest_3982 0.71 -0.4 4,150,274 + Psest_3982 0.71 +1.0 4,150,274 + Psest_3982 0.71 +0.0 4,150,274 + Psest_3982 0.71 +1.6 4,150,275 - Psest_3982 0.72 +0.3 4,150,275 - Psest_3982 0.72 -2.2 4,150,275 - Psest_3982 0.72 -0.4 4,150,292 + Psest_3982 0.73 -0.2 4,150,292 + Psest_3982 0.73 +0.3 4,150,293 - Psest_3982 0.73 -1.2 4,150,293 - Psest_3982 0.73 +0.3 4,150,293 - Psest_3982 0.73 -1.2 4,150,293 - Psest_3982 0.73 +1.8 4,150,293 - Psest_3982 0.73 +0.8 4,150,391 + Psest_3982 0.80 +1.1 4,150,391 + Psest_3982 0.80 -1.8 4,150,391 + Psest_3982 0.80 -1.3 4,150,391 + Psest_3982 0.80 +0.5 4,150,391 + Psest_3982 0.80 +1.1 4,150,391 + Psest_3982 0.80 -1.5 4,150,391 + Psest_3982 0.80 +0.9 4,150,391 + Psest_3982 0.80 -1.0 4,150,392 - Psest_3982 0.80 +0.6 4,150,392 - Psest_3982 0.80 +0.6 4,150,392 - Psest_3982 0.80 +1.6 4,150,392 - Psest_3982 0.80 +1.0 4,150,392 - Psest_3982 0.80 +0.6 4,150,761 + -0.7 4,150,761 + -1.0 4,150,761 + +0.7 4,150,761 + +1.4 4,150,762 - -0.6 4,150,762 - -2.0 4,151,001 + Psest_3983 0.35 -0.2 4,151,001 + Psest_3983 0.35 +0.4 4,151,001 + Psest_3983 0.35 -2.8 4,151,073 + Psest_3983 0.43 -1.1 4,151,073 + Psest_3983 0.43 -0.6 4,151,073 + Psest_3983 0.43 -0.2 4,151,073 + Psest_3983 0.43 +0.9 4,151,091 + Psest_3983 0.45 +0.4 4,151,091 + Psest_3983 0.45 -0.3 4,151,091 + Psest_3983 0.45 -1.3 4,151,091 + Psest_3983 0.45 -1.6 4,151,324 - Psest_3983 0.70 -1.3 4,151,328 + Psest_3983 0.71 -2.3 4,151,483 - Psest_3983 0.88 -1.2 4,151,592 + +0.0 4,151,592 + +1.1 4,151,592 + +1.2 4,151,593 - +1.3 4,151,610 + +0.7 4,151,611 - +1.5 4,151,652 + +0.5 4,151,783 + -0.1 4,151,783 + +2.7 4,151,792 + -1.1 4,151,905 - -0.5 4,151,905 - +1.7 4,152,080 + +0.1 4,152,080 + -1.6 4,152,080 + +0.1 4,152,080 + -1.6 4,152,080 + +0.8 4,152,080 + +0.6 4,152,080 + +1.2 4,152,080 + -0.8 4,152,080 + -0.5 4,152,080 + +0.0 4,152,080 + +0.3 4,152,080 + -0.5 4,152,080 + +0.0 4,152,080 + +0.5 4,152,081 - -0.2 4,152,081 - +1.2 4,152,081 - +0.0 4,152,083 - -0.4 4,152,162 + -0.6 4,152,163 - +1.1 4,152,163 - -0.2 4,152,213 - Psest_3984 0.12 -0.2 4,152,249 + Psest_3984 0.14 -0.6 4,152,249 + Psest_3984 0.14 -0.6 4,152,250 - Psest_3984 0.14 +0.6 4,152,250 - Psest_3984 0.14 -0.5 4,152,250 - Psest_3984 0.14 -1.2 4,152,482 + Psest_3984 0.26 -0.5 4,152,579 - Psest_3984 0.30 +0.1
Or see this region's nucleotide sequence