Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0682 and Psest_0683 are separated by 92 nucleotides Psest_0683 and Psest_0684 are separated by 11 nucleotides Psest_0684 and Psest_0685 are separated by 98 nucleotides
Psest_0682: Psest_0682 - tRNA dimethylallyltransferase, at 745,683 to 746,654
_0682
Psest_0683: Psest_0683 - RNA chaperone Hfq, at 746,747 to 747,001
_0683
Psest_0684: Psest_0684 - GTP-binding protein HflX, at 747,013 to 748,314
_0684
Psest_0685: Psest_0685 - HflK protein, at 748,413 to 749,591
_0685
Position (kb) 747
748
749 Strain fitness (log2 ratio) -2
-1
0
1 at 746.625 kb on + strand at 746.706 kb on + strand at 746.714 kb on + strand at 747.332 kb on + strand, within Psest_0684 at 747.332 kb on + strand, within Psest_0684 at 747.414 kb on + strand, within Psest_0684 at 747.525 kb on + strand, within Psest_0684 at 747.525 kb on + strand, within Psest_0684 at 747.525 kb on + strand, within Psest_0684 at 747.628 kb on + strand, within Psest_0684 at 747.961 kb on + strand, within Psest_0684 at 747.961 kb on + strand, within Psest_0684 at 747.961 kb on + strand, within Psest_0684 at 747.961 kb on + strand, within Psest_0684 at 748.312 kb on + strand at 748.388 kb on + strand at 748.388 kb on + strand at 748.394 kb on + strand at 748.394 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 746,625 + +1.5 746,706 + +0.3 746,714 + +1.3 747,332 + Psest_0684 0.25 -0.9 747,332 + Psest_0684 0.25 -1.5 747,414 + Psest_0684 0.31 -1.2 747,525 + Psest_0684 0.39 -1.9 747,525 + Psest_0684 0.39 -2.2 747,525 + Psest_0684 0.39 +0.5 747,628 + Psest_0684 0.47 -1.4 747,961 + Psest_0684 0.73 -0.5 747,961 + Psest_0684 0.73 -0.8 747,961 + Psest_0684 0.73 -1.7 747,961 + Psest_0684 0.73 -0.7 748,312 + -1.8 748,388 + -1.2 748,388 + -1.1 748,394 + +0.3 748,394 + +0.1
Or see this region's nucleotide sequence