Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1148

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
1,244,787	-				-0.1
1,244,838	+				-0.1
1,244,838	+				-2.4
1,244,838	+				-0.3
1,244,838	+				+0.9
1,244,838	+				-1.6
1,244,838	+				-0.1
1,244,839	-				+1.6
1,244,839	-				-1.4
1,244,839	-				+2.1
1,244,840	+				+0.3
1,244,840	+				+0.7
1,244,840	+				+0.4
1,244,840	+				-2.3
1,244,840	+				-0.7
1,244,840	+				-1.0
1,244,840	+				-0.7
1,244,840	+				-0.1
1,244,840	+				-0.4
1,244,840	+				+0.6
1,244,840	+				-1.4
1,244,840	+				+0.5
1,244,840	+				-1.0
1,244,840	+				-0.1
1,244,841	-				+0.9
1,244,841	-				+0.3
1,244,842	+				+0.7
1,244,842	+				-0.9
1,244,842	+				+1.3
1,244,842	+				+0.2
1,244,842	+				+1.2
1,244,842	+				-0.5
1,244,842	+				-1.1
1,244,842	+				-0.3
1,244,842	+				+0.9
1,244,842	+				-2.4
1,244,842	+				-0.3
1,244,842	+				-1.1
1,244,842	+				+0.3
1,244,842	+				+1.6
1,244,842	+				-0.6
1,244,934	+				-0.1
1,244,934	+				-1.3
1,244,934	+				-0.1
1,244,934	+				+0.0
1,244,934	+				+0.1
1,244,934	+				+4.4
1,244,934	+				-0.7
1,244,934	+				+0.6
1,244,934	+				-0.5
1,244,935	-				+1.5
1,244,935	-				+1.5
1,244,937	+				+1.3
1,244,937	+				+0.3
1,244,938	-				+0.7
1,244,938	-				-3.3
1,244,955	+				-1.7
1,244,955	+				+0.5
1,244,955	+				-0.6
1,244,956	-				+0.9
1,244,956	-				+0.6
1,244,956	-				-0.4
1,244,992	+		Psest_1147	0.13	-0.7
1,245,066	-		Psest_1147	0.23	-0.6
1,245,102	+		Psest_1147	0.28	+0.3
1,245,166	-		Psest_1147	0.36	+0.6
1,245,166	-		Psest_1147	0.36	-0.8
1,245,181	+		Psest_1147	0.38	-1.9
1,245,182	-		Psest_1147	0.38	+1.6
1,245,474	+		Psest_1147	0.77	+0.2
1,245,674	+				-0.5
1,245,674	+				-0.4
1,245,674	+				-0.0
1,245,674	+				+0.3
1,245,674	+				+0.4
1,245,675	-				+0.9
1,245,675	-				-0.7
1,245,675	-				-1.8
1,245,677	+				+0.4
1,245,992	+		Psest_1148	0.33	-0.8
1,245,992	+		Psest_1148	0.33	-0.2
1,245,992	+		Psest_1148	0.33	-2.1
1,245,992	+		Psest_1148	0.33	-0.6
1,245,992	+		Psest_1148	0.33	-0.7
1,245,992	+		Psest_1148	0.33	+0.2
1,245,992	+		Psest_1148	0.33	+2.5
1,245,993	-		Psest_1148	0.33	-0.7
1,245,993	-		Psest_1148	0.33	+0.5
1,245,993	-		Psest_1148	0.33	-0.1
1,245,993	-		Psest_1148	0.33	-3.0
1,245,993	-		Psest_1148	0.33	-1.4
1,245,993	-		Psest_1148	0.33	-2.0
1,246,075	+		Psest_1148	0.45	+0.5
1,246,076	-		Psest_1148	0.45	-1.0
1,246,076	-		Psest_1148	0.45	-0.5
1,246,106	-		Psest_1148	0.49	-1.0
1,246,159	+		Psest_1148	0.57	+0.1
1,246,160	-		Psest_1148	0.57	+0.4
1,246,161	+		Psest_1148	0.57	-0.8
1,246,294	+		Psest_1148	0.76	-1.2
1,246,503	-				+0.0
1,246,530	+				+1.1
1,246,530	+				+1.5
1,246,530	+				-1.0
1,246,530	+				+1.3
1,246,530	+				+0.4
1,246,530	+				+1.2
1,246,551	+				+0.4
1,246,551	+				+0.4
1,246,551	+				+1.2
1,246,551	+				-0.4
1,246,551	+				-2.1
1,246,552	-				-1.0
1,246,552	-				+2.2
1,246,552	-				+0.3
1,246,639	+		Psest_1149	0.10	+0.9
1,246,639	+		Psest_1149	0.10	-0.1
1,246,639	+		Psest_1149	0.10	+1.2
1,246,639	+		Psest_1149	0.10	+0.2
1,246,639	+		Psest_1149	0.10	-0.6
1,246,722	-		Psest_1149	0.29	+1.8
1,246,722	-		Psest_1149	0.29	-0.8
1,246,722	-		Psest_1149	0.29	+2.2
1,247,004	+				+0.7