Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1097

Experiment: Lactate-nitrate; anaerobic; nickel stress sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; nickel stress sample3
1,187,694	-		Psest_1096	0.13	-3.1
1,187,745	+		Psest_1096	0.18	-0.4
1,187,763	+		Psest_1096	0.20	-0.1
1,187,763	+		Psest_1096	0.20	+1.1
1,187,816	+		Psest_1096	0.25	+4.7
1,187,816	+		Psest_1096	0.25	-0.1
1,187,816	+		Psest_1096	0.25	-1.2
1,187,817	-		Psest_1096	0.25	-0.2
1,187,817	-		Psest_1096	0.25	+0.3
1,187,824	+		Psest_1096	0.26	+0.2
1,187,873	+		Psest_1096	0.30	-0.9
1,187,873	+		Psest_1096	0.30	+0.4
1,187,874	-		Psest_1096	0.30	+1.4
1,187,874	-		Psest_1096	0.30	+1.5
1,187,901	+		Psest_1096	0.33	-0.1
1,187,902	-		Psest_1096	0.33	+0.6
1,187,955	+		Psest_1096	0.38	+0.6
1,187,979	+		Psest_1096	0.40	-0.4
1,187,979	+		Psest_1096	0.40	-0.0
1,187,980	-		Psest_1096	0.40	+1.6
1,187,980	-		Psest_1096	0.40	-0.9
1,187,980	-		Psest_1096	0.40	-0.9
1,188,043	-		Psest_1096	0.46	+0.5
1,188,060	+		Psest_1096	0.47	+0.2
1,188,060	+		Psest_1096	0.47	+1.5
1,188,060	+		Psest_1096	0.47	+2.6
1,188,061	-		Psest_1096	0.48	-0.1
1,188,069	+		Psest_1096	0.48	+1.1
1,188,070	-		Psest_1096	0.48	-0.6
1,188,091	-		Psest_1096	0.50	-2.9
1,188,091	-		Psest_1096	0.50	+0.1
1,188,139	+		Psest_1096	0.55	+1.0
1,188,140	-		Psest_1096	0.55	+0.9
1,188,225	+		Psest_1096	0.63	-0.9
1,188,225	+		Psest_1096	0.63	+2.2
1,188,408	+		Psest_1096	0.80	+2.1
1,188,409	-		Psest_1096	0.80	+0.9
1,188,506	+		Psest_1096	0.89	-0.7
1,188,606	+				-1.3
1,188,606	+				+0.5
1,188,606	+				+1.1
1,188,606	+				+1.1
1,188,607	-				+1.4
1,188,607	-				-2.4
1,188,607	-				+1.4
1,188,607	-				+0.3
1,188,607	-				+1.6
1,188,607	-				+0.4
1,188,607	-				+0.1
1,188,607	-				+1.5
1,188,607	-				+0.1
1,188,607	-				+0.6
1,188,612	+				-0.1
1,188,613	-				-1.4
1,188,632	+				+1.3
1,188,632	+				-0.1
1,188,633	-				+1.2
1,188,633	-				+0.6
1,188,694	+				+0.9
1,188,869	+		Psest_1097	0.13	+0.6
1,188,869	+		Psest_1097	0.13	+0.2
1,188,869	+		Psest_1097	0.13	+1.0
1,188,870	-		Psest_1097	0.13	-1.4
1,189,030	-		Psest_1097	0.22	+1.1
1,189,117	+		Psest_1097	0.27	-0.1
1,189,117	+		Psest_1097	0.27	+2.9
1,189,117	+		Psest_1097	0.27	+1.0
1,189,117	+		Psest_1097	0.27	+1.6
1,189,118	-		Psest_1097	0.27	-0.2
1,189,183	+		Psest_1097	0.30	-1.4
1,189,183	+		Psest_1097	0.30	+0.9
1,189,183	+		Psest_1097	0.30	+2.7
1,189,184	-		Psest_1097	0.30	-1.7
1,189,221	+		Psest_1097	0.32	+0.3
1,189,221	+		Psest_1097	0.32	+0.2
1,189,265	+		Psest_1097	0.35	-0.4
1,189,265	+		Psest_1097	0.35	+0.2
1,189,265	+		Psest_1097	0.35	+0.9
1,189,265	+		Psest_1097	0.35	+0.1
1,189,266	-		Psest_1097	0.35	+0.5
1,189,266	-		Psest_1097	0.35	+0.4
1,189,266	-		Psest_1097	0.35	+1.0
1,189,316	+		Psest_1097	0.37	+3.5
1,189,316	+		Psest_1097	0.37	-0.9
1,189,316	+		Psest_1097	0.37	-2.1
1,189,316	+		Psest_1097	0.37	+0.6
1,189,316	+		Psest_1097	0.37	+0.9
1,189,317	-		Psest_1097	0.37	+1.0
1,189,317	-		Psest_1097	0.37	-0.7
1,189,460	+		Psest_1097	0.45	+1.2
1,189,530	+		Psest_1097	0.49	+2.3
1,189,586	+		Psest_1097	0.52	-0.3
1,189,587	-		Psest_1097	0.52	+0.9
1,189,599	+		Psest_1097	0.53	-0.7
1,189,599	+		Psest_1097	0.53	+0.4
1,189,599	+		Psest_1097	0.53	+1.2
1,189,600	-		Psest_1097	0.53	-1.4
1,189,600	-		Psest_1097	0.53	-0.2
1,189,605	+		Psest_1097	0.53	+1.3
1,189,605	+		Psest_1097	0.53	+3.8
1,189,640	+		Psest_1097	0.55	-0.2
1,189,641	-		Psest_1097	0.55	+0.5
1,189,653	+		Psest_1097	0.56	+2.8
1,189,653	+		Psest_1097	0.56	+0.2
1,189,726	+		Psest_1097	0.60	+0.7
1,189,726	+		Psest_1097	0.60	+2.3
1,189,727	-		Psest_1097	0.60	+1.4
1,189,727	-		Psest_1097	0.60	-0.4
1,189,794	+		Psest_1097	0.63	+1.0
1,189,794	+		Psest_1097	0.63	+2.6
1,189,794	+		Psest_1097	0.63	+0.2
1,189,794	+		Psest_1097	0.63	+1.7
1,189,794	+		Psest_1097	0.63	+0.8
1,189,794	+		Psest_1097	0.63	-1.2
1,189,794	+		Psest_1097	0.63	-0.1
1,189,795	-		Psest_1097	0.64	+0.3
1,189,795	-		Psest_1097	0.64	+0.3
1,189,820	+		Psest_1097	0.65	-1.9
1,189,820	+		Psest_1097	0.65	-0.6
1,189,821	-		Psest_1097	0.65	-1.3
1,189,821	-		Psest_1097	0.65	-0.1
1,189,880	+		Psest_1097	0.68	+1.4
1,189,949	+		Psest_1097	0.72	-0.1
1,189,961	+		Psest_1097	0.73	-0.0
1,189,961	+		Psest_1097	0.73	+1.1
1,189,961	+		Psest_1097	0.73	+0.6
1,189,962	-		Psest_1097	0.73	+0.6
1,189,973	-		Psest_1097	0.73	+0.8
1,189,973	-		Psest_1097	0.73	+0.5
1,189,973	-		Psest_1097	0.73	+1.6
1,190,081	-		Psest_1097	0.79	+1.1
1,190,145	-		Psest_1097	0.83	+1.1
1,190,157	-		Psest_1097	0.83	+0.2
1,190,185	+		Psest_1097	0.85	+0.3
1,190,185	+		Psest_1097	0.85	+1.6
1,190,185	+		Psest_1097	0.85	+1.4
1,190,185	+		Psest_1097	0.85	-0.2
1,190,186	-		Psest_1097	0.85	-0.9
1,190,186	-		Psest_1097	0.85	+2.1
1,190,186	-		Psest_1097	0.85	+2.1
1,190,214	-		Psest_1097	0.86	-1.9
1,190,418	+				-0.4
1,190,567	-				+1.0
1,190,575	-				+0.1
1,190,575	-				+1.6
1,190,575	-				+0.1
1,190,575	-				+1.0
1,190,591	+				+1.8
1,190,591	+				+0.6
1,190,591	+				+0.1
1,190,592	-				+0.9
1,190,592	-				+0.1
1,190,603	-				+0.6
1,190,640	-		Psest_1098	0.11	+0.1
1,190,640	-		Psest_1098	0.11	+0.6
1,190,640	-		Psest_1098	0.11	+2.0
1,190,700	-		Psest_1098	0.14	+0.0
1,190,743	+		Psest_1098	0.17	-1.0
1,190,743	+		Psest_1098	0.17	+0.6
1,190,834	+		Psest_1098	0.23	+1.4
1,190,835	-		Psest_1098	0.23	+0.0
1,190,882	+		Psest_1098	0.25	+1.2
1,190,897	+		Psest_1098	0.26	+0.1
1,190,958	+		Psest_1098	0.30	+0.6
1,190,959	-		Psest_1098	0.30	+2.1
1,191,012	-		Psest_1098	0.33	+0.3
1,191,089	+		Psest_1098	0.38	-1.4
1,191,116	+		Psest_1098	0.40	+1.2
1,191,117	-		Psest_1098	0.40	+1.8
1,191,249	+		Psest_1098	0.48	+0.6
1,191,270	-		Psest_1098	0.49	+0.9
1,191,273	+		Psest_1098	0.49	+1.6
1,191,273	+		Psest_1098	0.49	+1.1
1,191,273	+		Psest_1098	0.49	-1.7
1,191,273	+		Psest_1098	0.49	+0.2
1,191,274	-		Psest_1098	0.49	-1.1
1,191,277	+		Psest_1098	0.49	-0.8
1,191,277	+		Psest_1098	0.49	+0.1
1,191,277	+		Psest_1098	0.49	+0.1
1,191,278	-		Psest_1098	0.49	-0.4
1,191,278	-		Psest_1098	0.49	+1.5
1,191,301	+		Psest_1098	0.51	+2.5
1,191,301	+		Psest_1098	0.51	+1.1
1,191,302	-		Psest_1098	0.51	-0.4
1,191,305	+		Psest_1098	0.51	+0.6
1,191,305	+		Psest_1098	0.51	-1.6
1,191,306	-		Psest_1098	0.51	+0.6
1,191,306	-		Psest_1098	0.51	-1.4
1,191,306	-		Psest_1098	0.51	-3.2
1,191,428	+		Psest_1098	0.58	+0.3
1,191,462	-		Psest_1098	0.60	-0.9