Strain Fitness in Shewanella oneidensis MR-1 around SO3313

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,464,954	-				-1.2
3,465,134	-		SO3313	0.17	+1.3
3,465,378	-		SO3313	0.38	-1.5
3,465,411	-		SO3313	0.41	+0.5
3,465,859	-		SO3313	0.81	-2.6
3,465,961	-				-0.8
3,465,961	-				+0.3
3,466,088	-				+0.2
3,466,098	-				+0.3
3,466,108	-				-1.0
3,466,174	-		SO3314	0.13	-1.1
3,466,291	-		SO3314	0.28	-0.0
3,466,315	+		SO3314	0.31	+1.1
3,466,335	-		SO3314	0.34	-0.0
3,466,461	-		SO3314	0.50	-0.4
3,466,619	+		SO3314	0.70	+1.5
3,466,679	-		SO3314	0.77	+0.4
3,466,741	-		SO3314	0.85	+0.4
3,466,798	-				-0.4
3,466,808	+				+0.8
3,466,816	-				-1.1
3,466,816	-				-0.7
3,466,816	-				+0.8
3,466,874	-				-0.3
3,466,874	-				-0.8