Strain Fitness in Shewanella oneidensis MR-1 around SO3242

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,381,532	-	flgJ	SO3241	0.50	+0.0
3,381,537	-	flgJ	SO3241	0.50	+0.3
3,381,548	+	flgJ	SO3241	0.51	-0.3
3,381,548	+	flgJ	SO3241	0.51	-0.3
3,381,556	-	flgJ	SO3241	0.52	-1.3
3,381,574	+	flgJ	SO3241	0.53	+1.3
3,381,700	-	flgJ	SO3241	0.64	+1.3
3,381,702	+	flgJ	SO3241	0.64	-1.7
3,381,778	-	flgJ	SO3241	0.71	-2.7
3,381,800	+	flgJ	SO3241	0.73	+0.3
3,381,805	+	flgJ	SO3241	0.73	-2.0
3,381,825	+	flgJ	SO3241	0.75	-2.2
3,381,828	-	flgJ	SO3241	0.75	-0.3
3,381,895	-	flgJ	SO3241	0.81	-1.3
3,381,962	+	flgJ	SO3241	0.87	+0.7
3,382,204	-				-0.9
3,382,204	-				+0.3
3,382,205	+				-2.6
3,382,479	+	flgI	SO3242	0.32	-1.1
3,382,487	-	flgI	SO3242	0.33	-1.2
3,382,742	+	flgI	SO3242	0.56	-2.0
3,382,760	-	flgI	SO3242	0.58	-1.1
3,382,763	+	flgI	SO3242	0.58	-0.3
3,382,763	+	flgI	SO3242	0.58	-1.7
3,382,763	+	flgI	SO3242	0.58	-1.2
3,382,763	+	flgI	SO3242	0.58	+2.8
3,382,763	+	flgI	SO3242	0.58	-1.2
3,382,763	+	flgI	SO3242	0.58	+0.3
3,382,763	+	flgI	SO3242	0.58	-0.7
3,382,763	+	flgI	SO3242	0.58	-0.7
3,382,763	+	flgI	SO3242	0.58	-2.8
3,382,771	-	flgI	SO3242	0.59	-1.0
3,382,771	-	flgI	SO3242	0.59	-0.9
3,382,771	-	flgI	SO3242	0.59	+0.0
3,382,815	-	flgI	SO3242	0.63	-1.6
3,383,088	+	flgI	SO3242	0.88	-1.0
3,383,096	-	flgI	SO3242	0.88	-1.8
3,383,096	-	flgI	SO3242	0.88	-1.4
3,383,232	+				+0.2
3,383,261	-				-2.0
3,383,266	+				-2.8
3,383,372	-	flgH	SO3243	0.20	-1.2
3,383,383	+	flgH	SO3243	0.22	+0.7
3,383,457	-	flgH	SO3243	0.33	-2.0
3,383,457	-	flgH	SO3243	0.33	-1.2
3,383,468	-	flgH	SO3243	0.35	-1.8
3,383,574	-	flgH	SO3243	0.50	-2.1
3,383,583	+	flgH	SO3243	0.52	-1.8
3,383,734	+	flgH	SO3243	0.74	-1.8
3,383,807	+	flgH	SO3243	0.85	+0.3
3,383,885	+				+0.5
3,383,921	+				-0.8
3,384,017	-	flgG	SO3244	0.12	-1.9
3,384,027	-	flgG	SO3244	0.13	-0.9
3,384,045	-	flgG	SO3244	0.16	-1.5
3,384,116	-	flgG	SO3244	0.25	-1.5
3,384,145	-	flgG	SO3244	0.28	-0.7
3,384,183	+	flgG	SO3244	0.33	-1.5