Strain Fitness in Shewanella oneidensis MR-1 around SO_1210

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,257,033	+				+0.1
1,257,169	-				-3.6
1,257,188	+				-2.9
1,257,273	+		SO_1210	0.18	-3.2
1,257,338	+		SO_1210	0.25	-3.4
1,257,379	-		SO_1210	0.29	-1.3
1,257,418	-		SO_1210	0.34	-1.0
1,257,720	-		SO_1210	0.67	-3.5
1,257,812	-		SO_1210	0.77	-2.1
1,257,818	-		SO_1210	0.78	-3.0
1,257,963	-				-3.2
1,257,963	-				-1.3
1,257,992	+				-2.9
1,258,018	-				-1.3
1,258,049	-				+0.1
1,258,060	-				-1.1
1,258,270	+		SO1210.1	0.18	+2.5
1,258,397	+		SO1210.1	0.33	-1.4
1,258,581	-		SO1210.1	0.55	-0.9
1,258,602	+		SO1210.1	0.57	+1.5
1,258,615	+		SO1210.1	0.58	-1.7
1,258,717	-		SO1210.1	0.70	-0.8
1,258,947	-				+0.2