Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1155 and Psest_1156 are separated by 81 nucleotides Psest_1156 and Psest_1157 are separated by 2 nucleotides
Psest_1155: Psest_1155 - Methyl-accepting chemotaxis protein, at 1,254,172 to 1,255,794
_1155
Psest_1156: Psest_1156 - outer membrane component of uptake system, probably for ferrous iron (from data) , at 1,255,876 to 1,256,970
_1156
Psest_1157: Psest_1157 - Predicted periplasmic lipoprotein, at 1,256,973 to 1,258,049
_1157
Position (kb)
1255
1256
1257 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.486 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.493 kb on - strand, within Psest_1155 at 1255.493 kb on - strand, within Psest_1155 at 1255.695 kb on + strand at 1255.808 kb on + strand at 1255.809 kb on - strand at 1255.809 kb on - strand at 1255.809 kb on - strand at 1255.877 kb on + strand at 1255.878 kb on - strand at 1255.878 kb on - strand at 1255.888 kb on + strand at 1255.888 kb on + strand at 1255.888 kb on + strand at 1255.888 kb on + strand at 1255.889 kb on - strand at 1255.889 kb on - strand at 1255.889 kb on - strand at 1255.889 kb on - strand at 1256.088 kb on + strand, within Psest_1156 at 1256.088 kb on + strand, within Psest_1156 at 1256.151 kb on - strand, within Psest_1156 at 1256.258 kb on + strand, within Psest_1156 at 1256.259 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.640 kb on - strand, within Psest_1156 at 1256.640 kb on - strand, within Psest_1156 at 1256.705 kb on + strand, within Psest_1156 at 1256.705 kb on + strand, within Psest_1156 at 1256.706 kb on - strand, within Psest_1156 at 1256.706 kb on - strand, within Psest_1156 at 1256.706 kb on - strand, within Psest_1156 at 1256.754 kb on - strand, within Psest_1156 at 1256.754 kb on - strand, within Psest_1156 at 1257.067 kb on + strand at 1257.068 kb on - strand at 1257.316 kb on + strand, within Psest_1157 at 1257.570 kb on - strand, within Psest_1157 at 1257.610 kb on + strand, within Psest_1157 at 1257.611 kb on - strand, within Psest_1157 at 1257.611 kb on - strand, within Psest_1157 at 1257.623 kb on + strand, within Psest_1157 at 1257.624 kb on - strand, within Psest_1157 at 1257.915 kb on - strand, within Psest_1157 at 1257.916 kb on + strand, within Psest_1157 at 1257.916 kb on + strand, within Psest_1157 at 1257.916 kb on + strand, within Psest_1157 at 1257.917 kb on - strand, within Psest_1157 at 1257.917 kb on - strand, within Psest_1157 at 1257.917 kb on - strand, within Psest_1157 at 1257.930 kb on + strand, within Psest_1157 at 1257.931 kb on - strand, within Psest_1157
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 1,255,388 + Psest_1155 0.75 +1.4 1,255,388 + Psest_1155 0.75 +2.2 1,255,388 + Psest_1155 0.75 +0.0 1,255,388 + Psest_1155 0.75 -1.1 1,255,388 + Psest_1155 0.75 -0.0 1,255,388 + Psest_1155 0.75 +2.0 1,255,389 - Psest_1155 0.75 +1.2 1,255,389 - Psest_1155 0.75 -2.0 1,255,389 - Psest_1155 0.75 +0.6 1,255,389 - Psest_1155 0.75 -0.3 1,255,389 - Psest_1155 0.75 -0.1 1,255,486 + Psest_1155 0.81 -0.3 1,255,492 + Psest_1155 0.81 -1.2 1,255,492 + Psest_1155 0.81 +2.8 1,255,492 + Psest_1155 0.81 -2.0 1,255,492 + Psest_1155 0.81 +2.3 1,255,492 + Psest_1155 0.81 -0.0 1,255,492 + Psest_1155 0.81 +0.3 1,255,492 + Psest_1155 0.81 -0.2 1,255,493 - Psest_1155 0.81 -1.0 1,255,493 - Psest_1155 0.81 -1.2 1,255,695 + +2.2 1,255,808 + -0.6 1,255,809 - +0.6 1,255,809 - -1.9 1,255,809 - -0.1 1,255,877 + +0.1 1,255,878 - -0.8 1,255,878 - +1.4 1,255,888 + -1.8 1,255,888 + -1.9 1,255,888 + -1.8 1,255,888 + +1.2 1,255,889 - -3.1 1,255,889 - -3.4 1,255,889 - -0.9 1,255,889 - -1.3 1,256,088 + Psest_1156 0.19 -2.6 1,256,088 + Psest_1156 0.19 -1.5 1,256,151 - Psest_1156 0.25 -2.6 1,256,258 + Psest_1156 0.35 -1.5 1,256,259 - Psest_1156 0.35 -1.6 1,256,601 - Psest_1156 0.66 -0.5 1,256,601 - Psest_1156 0.66 -0.9 1,256,601 - Psest_1156 0.66 -1.5 1,256,601 - Psest_1156 0.66 -0.7 1,256,640 - Psest_1156 0.70 -1.6 1,256,640 - Psest_1156 0.70 -2.0 1,256,705 + Psest_1156 0.76 +1.6 1,256,705 + Psest_1156 0.76 -1.1 1,256,706 - Psest_1156 0.76 -0.1 1,256,706 - Psest_1156 0.76 -1.8 1,256,706 - Psest_1156 0.76 -1.3 1,256,754 - Psest_1156 0.80 -0.4 1,256,754 - Psest_1156 0.80 -1.2 1,257,067 + -0.2 1,257,068 - -0.8 1,257,316 + Psest_1157 0.32 -2.5 1,257,570 - Psest_1157 0.55 -0.7 1,257,610 + Psest_1157 0.59 -2.7 1,257,611 - Psest_1157 0.59 -2.0 1,257,611 - Psest_1157 0.59 -1.4 1,257,623 + Psest_1157 0.60 -3.1 1,257,624 - Psest_1157 0.60 -2.4 1,257,915 - Psest_1157 0.87 -1.1 1,257,916 + Psest_1157 0.88 -1.9 1,257,916 + Psest_1157 0.88 +1.5 1,257,916 + Psest_1157 0.88 +0.6 1,257,917 - Psest_1157 0.88 +0.5 1,257,917 - Psest_1157 0.88 -1.1 1,257,917 - Psest_1157 0.88 -0.5 1,257,930 + Psest_1157 0.89 +0.3 1,257,931 - Psest_1157 0.89 -1.9
Or see this region's nucleotide sequence