Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1850

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,954,000	+		Psest_1848	0.62	-1.4
1,954,000	+		Psest_1848	0.62	-0.8
1,954,001	-		Psest_1848	0.62	+1.3
1,954,042	+		Psest_1848	0.70	-0.1
1,954,126	+		Psest_1848	0.88	-2.4
1,954,126	+		Psest_1848	0.88	+0.8
1,954,127	-		Psest_1848	0.88	-0.3
1,954,138	+				-1.1
1,954,180	+				+1.4
1,954,181	-				+0.5
1,954,342	+		Psest_1849	0.15	+2.6
1,954,342	+		Psest_1849	0.15	+1.6
1,954,342	+		Psest_1849	0.15	-0.3
1,954,343	-		Psest_1849	0.15	+1.0
1,954,343	-		Psest_1849	0.15	-0.8
1,954,343	-		Psest_1849	0.15	+0.4
1,954,343	-		Psest_1849	0.15	-2.8
1,954,582	+		Psest_1849	0.46	-0.6
1,954,582	+		Psest_1849	0.46	+0.0
1,954,583	-		Psest_1849	0.46	-0.6
1,954,689	-		Psest_1849	0.60	+0.6
1,955,010	+				+4.2
1,955,011	-				-0.5
1,955,092	+		Psest_1850	0.18	-2.0
1,955,092	+		Psest_1850	0.18	-1.2
1,955,092	+		Psest_1850	0.18	-1.9
1,955,092	+		Psest_1850	0.18	+1.0
1,955,092	+		Psest_1850	0.18	-0.1
1,955,093	-		Psest_1850	0.18	-0.6
1,955,314	+		Psest_1850	0.61	+0.9
1,955,314	+		Psest_1850	0.61	-1.5
1,955,320	+		Psest_1850	0.62	+0.3
1,955,320	+		Psest_1850	0.62	-2.2
1,955,320	+		Psest_1850	0.62	+0.2
1,955,320	+		Psest_1850	0.62	+0.0
1,955,321	-		Psest_1850	0.63	+0.4
1,955,321	-		Psest_1850	0.63	-0.7
1,955,321	-		Psest_1850	0.63	-0.3
1,955,321	-		Psest_1850	0.63	-0.6
1,955,321	-		Psest_1850	0.63	-2.4
1,955,357	-		Psest_1850	0.70	-0.4
1,955,452	+		Psest_1850	0.88	-0.9
1,955,453	-		Psest_1850	0.88	-0.6
1,955,496	+				-2.0
1,955,497	-				+1.6
1,955,516	+				-0.5
1,955,516	+				-0.6
1,955,516	+				+1.2
1,955,516	+				+0.2
1,955,516	+				-0.2
1,955,517	-				-0.5
1,955,517	-				+1.8
1,955,517	-				+0.8
1,955,575	+				-0.4
1,955,575	+				+1.2
1,955,575	+				+1.4
1,955,576	-				+0.1
1,955,576	-				-0.4
1,955,576	-				-0.5
1,955,626	+				-1.1
1,955,626	+				+0.9
1,955,627	-				-1.4
1,955,674	+				+0.2
1,955,722	+		Psest_1851	0.13	-1.4
1,955,722	+		Psest_1851	0.13	+1.1
1,955,723	-		Psest_1851	0.13	+1.2
1,955,723	-		Psest_1851	0.13	-1.2
1,955,806	+		Psest_1851	0.20	-0.7
1,955,845	+		Psest_1851	0.23	+2.1
1,955,845	+		Psest_1851	0.23	-0.6
1,955,845	+		Psest_1851	0.23	-1.4
1,955,846	-		Psest_1851	0.23	+1.3
1,955,846	-		Psest_1851	0.23	-0.4
1,955,846	-		Psest_1851	0.23	+1.4
1,955,846	-		Psest_1851	0.23	+0.5
1,955,858	-		Psest_1851	0.24	-1.0
1,955,858	-		Psest_1851	0.24	+1.7
1,955,948	-		Psest_1851	0.32	+0.5
1,955,953	+		Psest_1851	0.32	+0.4
1,955,953	+		Psest_1851	0.32	+0.8