Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1162
Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.00390625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,261,899 | + | Psest_1161 | 0.16 | +0.5 | |
| 1,261,900 | - | Psest_1161 | 0.16 | +0.9 | |
| 1,261,900 | - | Psest_1161 | 0.16 | +1.6 | |
| 1,262,260 | - | Psest_1161 | 0.56 | -0.6 | |
| 1,262,636 | + | +0.6 | |||
| 1,262,636 | + | +1.6 | |||
| 1,263,078 | - | Psest_1162 | 0.60 | -1.3 | |
| 1,263,078 | - | Psest_1162 | 0.60 | -1.0 | |
| 1,263,156 | - | Psest_1162 | 0.72 | -2.1 | |
| 1,263,336 | - | -1.1 | |||
| 1,263,336 | - | +1.9 | |||
| 1,263,336 | - | +0.4 | |||
| 1,263,448 | - | +0.6 | |||
| 1,264,212 | - | Psest_1163 | 0.36 | -1.2 |
Or see this region's nucleotide sequence