Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05645
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,184,124 | - | BWI76_RS05640 | 0.25 | +0.3 | |
| 1,184,124 | - | BWI76_RS05640 | 0.25 | -1.3 | |
| 1,184,205 | + | BWI76_RS05640 | 0.35 | -0.3 | |
| 1,185,229 | + | BWI76_RS05645 | 0.26 | -0.1 | |
| 1,185,264 | + | BWI76_RS05645 | 0.29 | +0.5 | |
| 1,185,272 | - | BWI76_RS05645 | 0.29 | +0.2 | |
| 1,185,719 | - | BWI76_RS05645 | 0.59 | +0.6 | |
| 1,185,821 | + | BWI76_RS05645 | 0.66 | +1.6 | |
| 1,185,829 | - | BWI76_RS05645 | 0.67 | +0.9 | |
| 1,186,333 | - | -0.0 | |||
| 1,186,673 | + | BWI76_RS05650 | 0.23 | +1.0 | |
| 1,186,681 | - | BWI76_RS05650 | 0.24 | -0.1 | |
| 1,186,691 | - | BWI76_RS05650 | 0.25 | +0.4 | |
| 1,186,701 | - | BWI76_RS05650 | 0.26 | +0.1 | |
| 1,186,772 | + | BWI76_RS05650 | 0.32 | -0.7 | |
| 1,187,019 | + | BWI76_RS05650 | 0.53 | +1.9 | |
| 1,187,022 | - | BWI76_RS05650 | 0.53 | +0.3 | |
| 1,187,044 | + | BWI76_RS05650 | 0.55 | -0.6 | |
| 1,187,168 | + | BWI76_RS05650 | 0.65 | -0.3 | |
| 1,187,204 | + | BWI76_RS05650 | 0.68 | +0.9 | |
| 1,187,214 | - | BWI76_RS05650 | 0.69 | -0.0 | |
| 1,187,290 | + | BWI76_RS05650 | 0.76 | +0.3 | |
| 1,187,304 | - | BWI76_RS05650 | 0.77 | -0.7 |
Or see this region's nucleotide sequence