Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21200
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,437,147 | + | BWI76_RS21195 | 0.23 | +0.3 | |
| 4,437,434 | - | BWI76_RS21195 | 0.48 | +0.3 | |
| 4,437,522 | - | BWI76_RS21195 | 0.56 | +0.5 | |
| 4,437,539 | - | BWI76_RS21195 | 0.57 | -0.4 | |
| 4,437,577 | + | BWI76_RS21195 | 0.60 | +0.3 | |
| 4,437,779 | + | BWI76_RS21195 | 0.78 | +0.8 | |
| 4,437,927 | - | +1.8 | |||
| 4,437,951 | + | +0.8 | |||
| 4,437,963 | - | -1.3 | |||
| 4,438,392 | + | BWI76_RS21200 | 0.35 | +1.9 | |
| 4,438,461 | + | BWI76_RS21200 | 0.43 | -0.4 | |
| 4,438,526 | - | BWI76_RS21200 | 0.51 | +0.2 | |
| 4,438,526 | - | BWI76_RS21200 | 0.51 | +2.9 | |
| 4,438,549 | - | BWI76_RS21200 | 0.54 | +0.8 | |
| 4,438,767 | + | BWI76_RS21200 | 0.80 | -2.0 | |
| 4,438,979 | + | +0.7 | |||
| 4,439,107 | + | BWI76_RS21205 | 0.12 | +0.4 | |
| 4,439,110 | - | BWI76_RS21205 | 0.12 | +1.0 | |
| 4,439,247 | - | BWI76_RS21205 | 0.22 | -0.8 | |
| 4,439,282 | + | BWI76_RS21205 | 0.24 | -1.1 | |
| 4,439,373 | + | BWI76_RS21205 | 0.30 | +0.7 | |
| 4,439,405 | - | BWI76_RS21205 | 0.33 | +0.2 | |
| 4,439,577 | + | BWI76_RS21205 | 0.45 | +1.1 | |
| 4,439,708 | - | BWI76_RS21205 | 0.54 | -0.7 | |
| 4,439,923 | + | BWI76_RS21205 | 0.69 | +0.2 |
Or see this region's nucleotide sequence