Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19785
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,136,674 | - | BWI76_RS19780 | 0.55 | -1.8 | |
| 4,136,725 | - | BWI76_RS19780 | 0.57 | +1.6 | |
| 4,136,808 | - | BWI76_RS19780 | 0.62 | +0.7 | |
| 4,136,853 | - | BWI76_RS19780 | 0.65 | +1.0 | |
| 4,136,975 | + | BWI76_RS19780 | 0.71 | +0.2 | |
| 4,136,990 | - | BWI76_RS19780 | 0.72 | -2.2 | |
| 4,137,365 | + | +1.2 | |||
| 4,137,522 | + | +2.5 | |||
| 4,137,747 | + | BWI76_RS19785 | 0.22 | -3.3 | |
| 4,137,922 | - | BWI76_RS19785 | 0.38 | +1.6 | |
| 4,137,935 | + | BWI76_RS19785 | 0.39 | +0.6 | |
| 4,138,357 | - | BWI76_RS19785 | 0.78 | +3.1 | |
| 4,138,387 | - | BWI76_RS19785 | 0.81 | -1.6 | |
| 4,138,422 | - | BWI76_RS19785 | 0.84 | +0.3 | |
| 4,138,554 | + | -0.4 | |||
| 4,138,562 | - | -1.6 | |||
| 4,138,837 | - | BWI76_RS19790 | 0.23 | -1.0 | |
| 4,138,964 | - | BWI76_RS19790 | 0.36 | -3.3 | |
| 4,139,086 | + | BWI76_RS19790 | 0.48 | -1.2 | |
| 4,139,115 | + | BWI76_RS19790 | 0.50 | -0.6 | |
| 4,139,181 | + | BWI76_RS19790 | 0.57 | -0.8 | |
| 4,139,189 | - | BWI76_RS19790 | 0.58 | +0.4 | |
| 4,139,393 | + | BWI76_RS19790 | 0.78 | -3.0 |
Or see this region's nucleotide sequence