Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09750
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,044,386 | - | BWI76_RS09745 | 0.56 | -0.1 | |
| 2,044,549 | - | BWI76_RS09745 | 0.65 | +2.8 | |
| 2,045,018 | + | +0.7 | |||
| 2,045,018 | + | -0.1 | |||
| 2,045,026 | - | +0.3 | |||
| 2,045,041 | + | -0.4 | |||
| 2,045,041 | + | +0.8 | |||
| 2,045,259 | - | +1.0 | |||
| 2,045,259 | - | +0.3 | |||
| 2,045,337 | + | +0.9 | |||
| 2,045,347 | + | BWI76_RS09750 | 0.10 | +0.5 | |
| 2,045,354 | + | BWI76_RS09750 | 0.11 | +1.4 | |
| 2,045,361 | - | BWI76_RS09750 | 0.12 | +0.9 | |
| 2,045,433 | - | BWI76_RS09750 | 0.23 | +0.8 | |
| 2,045,490 | + | BWI76_RS09750 | 0.31 | +0.3 | |
| 2,045,778 | - | BWI76_RS09750 | 0.72 | +0.9 | |
| 2,045,796 | + | BWI76_RS09750 | 0.75 | +2.4 | |
| 2,045,934 | + | -0.3 | |||
| 2,045,999 | - | +1.5 | |||
| 2,046,054 | - | -1.9 | |||
| 2,046,172 | + | -2.0 | |||
| 2,046,342 | - | BWI76_RS09755 | 0.17 | +0.2 | |
| 2,046,471 | + | BWI76_RS09755 | 0.29 | +1.2 | |
| 2,046,808 | - | BWI76_RS09755 | 0.60 | -2.1 | |
| 2,046,851 | + | BWI76_RS09755 | 0.64 | +0.2 | |
| 2,046,910 | - | BWI76_RS09755 | 0.69 | -1.1 | |
| 2,046,910 | - | BWI76_RS09755 | 0.69 | -2.0 | |
| 2,046,931 | + | BWI76_RS09755 | 0.71 | -3.2 |
Or see this region's nucleotide sequence