Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06200
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,299,325 | - | +0.3 | |||
| 1,299,477 | + | -0.3 | |||
| 1,299,630 | + | BWI76_RS06195 | 0.29 | -1.2 | |
| 1,299,663 | - | BWI76_RS06195 | 0.34 | -1.2 | |
| 1,299,665 | + | BWI76_RS06195 | 0.34 | +0.2 | |
| 1,299,717 | + | BWI76_RS06195 | 0.42 | +1.1 | |
| 1,299,773 | + | BWI76_RS06195 | 0.51 | -0.3 | |
| 1,299,809 | + | BWI76_RS06195 | 0.56 | +0.8 | |
| 1,299,809 | + | BWI76_RS06195 | 0.56 | -0.3 | |
| 1,299,817 | - | BWI76_RS06195 | 0.57 | +0.7 | |
| 1,299,891 | + | BWI76_RS06195 | 0.68 | -2.2 | |
| 1,299,902 | + | BWI76_RS06195 | 0.70 | +0.2 | |
| 1,300,156 | - | -0.3 | |||
| 1,300,179 | - | +0.0 | |||
| 1,300,250 | + | BWI76_RS06200 | 0.21 | +0.9 | |
| 1,300,448 | + | +0.8 | |||
| 1,300,664 | - | BWI76_RS06205 | 0.16 | -2.0 | |
| 1,300,989 | - | BWI76_RS06205 | 0.52 | -1.0 | |
| 1,301,100 | - | BWI76_RS06205 | 0.64 | +1.6 | |
| 1,301,333 | + | BWI76_RS06205 | 0.89 | -4.3 |
Or see this region's nucleotide sequence