Strain Fitness in Pseudomonas simiae WCS417 around PS417_03725
Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Vogels_fungal_media; pH 5.5 |
|---|---|---|---|---|---|
| remove | |||||
| 843,818 | + | -0.4 | |||
| 843,818 | + | -0.5 | |||
| 843,818 | + | +0.1 | |||
| 843,819 | - | -0.0 | |||
| 843,985 | + | PS417_03725 | 0.12 | +0.2 | |
| 844,062 | + | PS417_03725 | 0.21 | +0.8 | |
| 844,252 | - | PS417_03725 | 0.42 | +0.8 | |
| 844,465 | + | PS417_03725 | 0.66 | +1.1 | |
| 844,517 | - | PS417_03725 | 0.72 | +0.4 | |
| 844,517 | - | PS417_03725 | 0.72 | -0.4 | |
| 844,529 | - | PS417_03725 | 0.73 | +0.1 | |
| 844,758 | + | +1.5 | |||
| 844,774 | + | -0.9 | |||
| 844,774 | + | +0.1 | |||
| 844,778 | + | -0.1 | |||
| 844,778 | + | -0.4 | |||
| 844,779 | - | -0.8 | |||
| 844,784 | + | +0.2 | |||
| 844,785 | - | +0.1 | |||
| 844,785 | - | -0.3 | |||
| 844,825 | + | -0.4 | |||
| 844,975 | - | -0.2 | |||
| 845,047 | + | PS417_03730 | 0.13 | -0.3 | |
| 845,156 | - | PS417_03730 | 0.18 | +1.4 | |
| 845,388 | - | PS417_03730 | 0.29 | -0.9 |
Or see this region's nucleotide sequence