Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27955

Experiment: Glucose (C) and Betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS
6,220,538	+		PFLU_RS27945	0.19	+1.3
6,220,538	+		PFLU_RS27945	0.19	+0.3
6,220,538	+		PFLU_RS27945	0.19	+0.0
6,220,538	+		PFLU_RS27945	0.19	+0.4
6,220,539	-		PFLU_RS27945	0.19	+0.0
6,220,539	-		PFLU_RS27945	0.19	+1.0
6,220,539	-		PFLU_RS27945	0.19	-3.2
6,220,539	-		PFLU_RS27945	0.19	-1.3
6,220,634	+		PFLU_RS27945	0.38	-0.7
6,220,634	+		PFLU_RS27945	0.38	-0.9
6,220,634	+		PFLU_RS27945	0.38	-0.2
6,220,634	+		PFLU_RS27945	0.38	-0.8
6,220,634	+		PFLU_RS27945	0.38	+1.1
6,220,634	+		PFLU_RS27945	0.38	-2.7
6,220,635	-		PFLU_RS27945	0.39	+0.4
6,220,635	-		PFLU_RS27945	0.39	-0.6
6,220,675	+		PFLU_RS27945	0.47	-0.2
6,220,675	+		PFLU_RS27945	0.47	+1.6
6,220,675	+		PFLU_RS27945	0.47	+0.3
6,220,676	-		PFLU_RS27945	0.47	-1.0
6,220,676	-		PFLU_RS27945	0.47	-0.4
6,220,715	+		PFLU_RS27945	0.54	+1.8
6,220,716	-		PFLU_RS27945	0.55	+1.1
6,220,716	-		PFLU_RS27945	0.55	+0.3
6,221,028	+				+1.4
6,221,028	+				-0.8
6,221,029	-				+0.9
6,221,029	-				+0.1
6,221,029	-				+1.6
6,221,029	-				-3.3
6,221,031	+				-0.2
6,221,031	+				-0.2
6,221,031	+				+0.0
6,221,031	+				-0.6
6,221,031	+				-2.9
6,221,031	+				-0.4
6,221,032	-				+3.7
6,221,032	-				+0.7
6,221,032	-				+2.5
6,221,032	-				+1.0
6,221,032	-				+1.4
6,221,032	-				+0.7
6,221,032	-				-0.2
6,221,032	-				+0.5
6,221,032	-				-0.0
6,221,038	-				-0.0
6,221,070	-				-0.1
6,221,159	+				+0.3
6,221,160	-				+0.0
6,221,332	+		PFLU_RS27950	0.62	-1.8
6,221,332	+		PFLU_RS27950	0.62	-0.4
6,221,332	+		PFLU_RS27950	0.62	+0.0
6,221,332	+		PFLU_RS27950	0.62	-0.3
6,221,333	-		PFLU_RS27950	0.63	+0.5
6,221,333	-		PFLU_RS27950	0.63	-0.4
6,221,333	-		PFLU_RS27950	0.63	+0.5
6,221,333	-		PFLU_RS27950	0.63	-1.8
6,221,333	-		PFLU_RS27950	0.63	+0.7
6,221,333	-		PFLU_RS27950	0.63	-1.6
6,221,333	-		PFLU_RS27950	0.63	+1.4
6,221,333	-		PFLU_RS27950	0.63	+1.8
6,221,333	-		PFLU_RS27950	0.63	+1.7
6,221,431	+				-0.3
6,221,432	-				+0.0
6,221,432	-				-1.0
6,221,432	-				-1.0
6,221,432	-				-0.4
6,221,432	-				+0.6
6,221,432	-				+1.5
6,221,432	-				-0.0
6,221,432	-				-1.9
6,221,527	+				+0.4
6,221,528	-				-1.0
6,221,528	-				-1.4
6,221,528	-				+0.1
6,221,535	+				-0.9
6,221,658	+		PFLU_RS27955	0.12	-1.7
6,221,658	+		PFLU_RS27955	0.12	-0.7
6,221,659	-		PFLU_RS27955	0.12	+0.9
6,221,659	-		PFLU_RS27955	0.12	+2.1
6,221,659	-		PFLU_RS27955	0.12	-0.5
6,221,720	+		PFLU_RS27955	0.18	-2.4
6,221,721	-		PFLU_RS27955	0.18	+1.1
6,221,812	+		PFLU_RS27955	0.26	-1.9
6,221,813	-		PFLU_RS27955	0.26	-1.8
6,221,815	+		PFLU_RS27955	0.26	-0.9
6,221,815	+		PFLU_RS27955	0.26	-1.6
6,221,816	-		PFLU_RS27955	0.26	-2.4
6,221,816	-		PFLU_RS27955	0.26	-1.4
6,221,816	-		PFLU_RS27955	0.26	-2.2
6,221,816	-		PFLU_RS27955	0.26	-2.4
6,221,816	-		PFLU_RS27955	0.26	-2.8
6,221,839	+		PFLU_RS27955	0.28	-0.2
6,221,839	+		PFLU_RS27955	0.28	-1.9
6,221,839	+		PFLU_RS27955	0.28	-1.9
6,221,840	-		PFLU_RS27955	0.28	-3.0
6,221,840	-		PFLU_RS27955	0.28	-0.5
6,221,840	-		PFLU_RS27955	0.28	+0.1
6,221,840	-		PFLU_RS27955	0.28	-0.7
6,221,840	-		PFLU_RS27955	0.28	-2.2
6,221,884	+		PFLU_RS27955	0.32	-1.9
6,221,884	+		PFLU_RS27955	0.32	-0.3
6,221,884	+		PFLU_RS27955	0.32	-1.4
6,221,884	+		PFLU_RS27955	0.32	+1.1
6,221,884	+		PFLU_RS27955	0.32	-3.8
6,221,884	+		PFLU_RS27955	0.32	-1.6
6,221,885	-		PFLU_RS27955	0.33	-0.7
6,221,885	-		PFLU_RS27955	0.33	-0.7
6,221,885	-		PFLU_RS27955	0.33	-2.8
6,221,885	-		PFLU_RS27955	0.33	-1.5
6,222,028	+		PFLU_RS27955	0.45	-2.4
6,222,029	-		PFLU_RS27955	0.46	-2.8
6,222,029	-		PFLU_RS27955	0.46	-1.0
6,222,029	-		PFLU_RS27955	0.46	-2.0
6,222,029	-		PFLU_RS27955	0.46	+0.7
6,222,029	-		PFLU_RS27955	0.46	-1.8
6,222,149	+		PFLU_RS27955	0.56	+1.1
6,222,150	-		PFLU_RS27955	0.57	-1.9
6,222,482	-		PFLU_RS27955	0.87	-2.3
6,222,635	+				-3.6
6,222,635	+				-0.3
6,222,682	-				-0.8
6,222,696	-				-0.2
6,222,696	-				+0.6
6,222,720	+				-1.9
6,222,720	+				-2.2
6,222,720	+				-1.2
6,222,739	-				-2.2
6,222,759	+				-0.4
6,222,760	-				+2.0
6,222,760	-				-0.4
6,222,789	+				+2.0
6,222,789	+				-0.9
6,222,790	-				-0.9
6,222,790	-				+0.1
6,222,790	-				+1.4
6,222,790	-				+0.3
6,222,790	-				-0.3
6,222,790	-				+0.1
6,222,790	-				+0.9
6,222,790	-				+2.1
6,222,790	-				+0.4
6,222,790	-				-0.7
6,222,791	+				-0.8
6,222,791	+				-0.7
6,222,791	+				-0.7
6,222,791	+				+0.4
6,222,791	+				-0.6
6,222,791	+				+0.6
6,222,791	+				-3.2
6,222,791	+				+0.1
6,222,791	+				-1.4
6,222,791	+				-2.6
6,222,791	+				-1.3
6,222,791	+				+0.1
6,222,791	+				-0.7
6,222,791	+				+1.3
6,222,792	-				-0.4
6,222,792	-				-0.0
6,222,792	-				-0.0
6,222,792	-				+0.1
6,222,792	-				-0.4
6,222,792	-				+0.2
6,222,792	-				-1.1
6,222,792	-				+1.0
6,222,792	-				+1.6
6,222,792	-				+1.7
6,222,792	-				-0.2
6,222,792	-				-0.2
6,222,792	-				-2.4
6,222,792	-				+0.1
6,222,793	+				-0.9
6,222,793	+				-0.4
6,222,793	+				+0.7
6,222,793	+				-0.4
6,222,793	+				-1.3
6,222,793	+				-1.2
6,222,793	+				+2.1
6,222,793	+				-1.6
6,222,793	+				-1.4
6,222,793	+				-0.9
6,222,793	+				-0.6
6,222,793	+				+0.6
6,222,794	-				-0.0
6,222,794	-				+0.3
6,222,794	-				+0.8
6,222,794	-				+0.7
6,222,794	-				+0.8
6,222,794	-				-0.1
6,222,794	-				+0.2
6,222,794	-				-1.0
6,222,794	-				+0.4
6,222,794	-				-0.7
6,222,794	-				+0.6
6,222,794	-				+1.0
6,222,794	-				-0.2
6,222,794	-				-0.9
6,222,794	-				-0.8
6,222,794	-				+0.2
6,222,794	-				+0.3
6,222,794	-				+1.7
6,222,794	-				-1.3
6,222,817	+				-0.8
6,222,817	+				-1.2
6,222,817	+				-1.3
6,222,818	-				+1.0
6,222,948	+				+2.0
6,222,948	+				+0.8
6,222,965	+				+0.4
6,222,965	+				+0.4
6,222,965	+				+0.1
6,222,965	+				+1.4
6,222,966	-				-1.2
6,222,966	-				+1.1
6,222,966	-				-0.5
6,222,966	-				+2.1
6,222,966	-				+0.5
6,222,969	+				+2.6
6,222,969	+				-1.7
6,222,969	+				-1.4
6,222,969	+				+1.6
6,222,969	+				-0.4
6,222,969	+				+1.1
6,222,969	+				+0.7
6,222,969	+				-0.1
6,222,969	+				-0.2
6,222,969	+				-0.9
6,222,970	-				+2.1
6,222,970	-				-0.3
6,222,970	-				-1.5
6,222,970	-				-1.2
6,222,970	-				-0.9
6,222,973	+				-0.9
6,222,973	+				+0.1
6,222,973	+				+0.4
6,222,973	+				-0.2
6,222,974	-				+1.4
6,222,974	-				-1.3
6,223,023	-				+0.6
6,223,023	-				+0.9
6,223,023	-				-1.2
6,223,023	-				-1.5
6,223,023	-				+0.2
6,223,023	-				+1.0
6,223,085	-				+0.9
6,223,085	-				-0.7
6,223,094	+				-1.0
6,223,094	+				-0.8
6,223,094	+				-1.8
6,223,094	+				+0.6
6,223,094	+				-0.1
6,223,094	+				+0.7
6,223,095	-				-2.5
6,223,095	-				-1.9
6,223,095	-				-1.8
6,223,095	-				-1.0
6,223,108	-				-0.6
6,223,151	+				-0.4
6,223,151	+				-0.9
6,223,170	+				-2.7
6,223,170	+				+0.7
6,223,170	+				-1.0
6,223,170	+				-0.4
6,223,170	+				+1.6
6,223,170	+				+0.6
6,223,170	+				-0.3
6,223,171	-				-2.7
6,223,210	+				+0.2
6,223,210	+				-0.7
6,223,210	+				+0.3
6,223,210	+				-1.4
6,223,210	+				-0.8
6,223,211	-				+0.4
6,223,271	+				+0.6
6,223,271	+				+0.1
6,223,271	+				+2.5
6,223,272	-				+0.6
6,223,582	+		PFLU_RS27960	0.31	-1.0