Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32520

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,866,752	+		BPHYT_RS32515	0.44	+0.5
2,866,830	+		BPHYT_RS32515	0.50	+0.4
2,866,897	+		BPHYT_RS32515	0.56	+0.3
2,866,898	-		BPHYT_RS32515	0.56	+0.1
2,867,209	+		BPHYT_RS32515	0.82	-0.6
2,867,549	-				-1.4
2,867,560	+				+1.0
2,867,977	+		BPHYT_RS32520	0.32	+0.8
2,868,036	-		BPHYT_RS32520	0.39	-0.9
2,868,247	+		BPHYT_RS32520	0.64	-1.4
2,868,437	+		BPHYT_RS32520	0.86	+0.5
2,868,438	-		BPHYT_RS32520	0.86	-2.1
2,868,646	-				-0.5
2,868,651	+				-0.7
2,868,652	-				+0.7
2,869,140	+				-0.6
2,869,186	+				-2.0
2,869,206	-				+0.4
2,869,232	+				+0.5
2,869,233	-				-1.1
2,869,233	-				-2.0
2,869,340	-		BPHYT_RS32525	0.26	+0.2
2,869,408	+		BPHYT_RS32525	0.40	+1.8