Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06725

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
1,290,260	-		MMP_RS06715	0.80	+2.3
1,290,260	-		MMP_RS06715	0.80	+4.8
1,290,413	+		MMP_RS06715	0.88	+3.5
1,290,416	+		MMP_RS06715	0.89	+4.4
1,290,422	+		MMP_RS06715	0.89	+3.7
1,290,422	+		MMP_RS06715	0.89	+3.3
1,290,626	+				+3.4
1,290,679	-				+3.4
1,290,749	+		MMP_RS06720	0.24	+2.8
1,290,945	-		MMP_RS06720	0.79	+2.9
1,290,949	-		MMP_RS06720	0.80	+4.9
1,290,980	-		MMP_RS06720	0.88	+3.7
1,290,981	+		MMP_RS06720	0.89	+3.6
1,290,981	+		MMP_RS06720	0.89	+4.3
1,290,983	-		MMP_RS06720	0.89	+2.8
1,290,985	-		MMP_RS06720	0.90	+3.7
1,290,985	-		MMP_RS06720	0.90	+3.9
1,290,986	+				+4.0
1,290,986	+				+4.2
1,291,044	-				-1.2
1,291,045	+				+1.1
1,291,052	-				+0.3
1,291,052	-				-1.3
1,291,125	+				-2.7
1,291,125	+				-1.7
1,291,126	-				-1.5
1,291,176	+				-1.6
1,291,176	+				-2.2
1,291,177	-				-0.6
1,291,178	+				-0.7
1,291,178	+				-1.4
1,291,212	+				-2.1
1,291,220	-				-2.3
1,291,264	+				-1.7
1,291,428	-		MMP_RS06725	0.14	-0.4
1,291,440	+		MMP_RS06725	0.14	-1.0
1,291,476	-		MMP_RS06725	0.17	-2.2
1,291,637	+		MMP_RS06725	0.28	-4.0
1,291,640	-		MMP_RS06725	0.29	-1.3
1,291,641	+		MMP_RS06725	0.29	-3.2
1,291,641	+		MMP_RS06725	0.29	-2.2
1,291,641	+		MMP_RS06725	0.29	-0.5
1,291,687	+		MMP_RS06725	0.32	-3.3
1,291,756	+		MMP_RS06725	0.37	-1.0
1,291,756	+		MMP_RS06725	0.37	-2.1
1,291,756	+		MMP_RS06725	0.37	-2.5
1,291,759	-		MMP_RS06725	0.37	-0.4
1,291,759	-		MMP_RS06725	0.37	-2.4
1,291,789	+		MMP_RS06725	0.39	-2.2
1,291,789	+		MMP_RS06725	0.39	-2.4
1,291,791	-		MMP_RS06725	0.39	-1.4
1,291,792	+		MMP_RS06725	0.40	-2.5
1,291,821	+		MMP_RS06725	0.42	-2.7
1,291,837	-		MMP_RS06725	0.43	-1.0
1,291,847	+		MMP_RS06725	0.43	-3.2
1,291,852	-		MMP_RS06725	0.44	-1.8
1,291,882	+		MMP_RS06725	0.46	-2.6
1,291,938	+		MMP_RS06725	0.50	-2.7
1,291,965	-		MMP_RS06725	0.52	-2.7
1,291,965	-		MMP_RS06725	0.52	-2.0
1,292,009	-		MMP_RS06725	0.55	-3.7
1,292,031	+		MMP_RS06725	0.57	-2.7
1,292,175	-		MMP_RS06725	0.67	-2.7
1,292,233	+		MMP_RS06725	0.71	-1.9
1,292,357	+		MMP_RS06725	0.80	-1.0
1,292,390	-		MMP_RS06725	0.82	-1.0
1,292,793	+		MMP_RS06730	0.17	-3.4
1,293,000	+		MMP_RS06730	0.44	-3.4
1,293,067	-		MMP_RS06730	0.53	-2.9
1,293,118	+		MMP_RS06730	0.59	-0.5
1,293,368	-				-2.0
1,293,399	-				-1.2
1,293,438	-				-3.3
1,293,492	+				-0.4
1,293,496	-				+1.0
1,293,525	+				-0.5
1,293,525	+				+1.7
1,293,553	-				+2.5
1,293,553	-				+2.6
1,293,554	+				-0.2
1,293,633	-		MMP_RS06735	0.13	+0.7