Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06525
Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,253,016 | - | MMP_RS06520 | 0.46 | -2.0 | |
| 1,253,152 | - | MMP_RS06520 | 0.59 | +1.9 | |
| 1,253,214 | + | MMP_RS06520 | 0.65 | +1.0 | |
| 1,253,380 | - | MMP_RS06520 | 0.82 | +0.4 | |
| 1,253,380 | - | MMP_RS06520 | 0.82 | +1.2 | |
| 1,253,381 | + | MMP_RS06520 | 0.82 | +1.7 | |
| 1,253,381 | + | MMP_RS06520 | 0.82 | -0.7 | |
| 1,253,441 | - | MMP_RS06520 | 0.88 | -1.4 | |
| 1,253,507 | + | -0.6 | |||
| 1,253,569 | + | -1.9 | |||
| 1,253,587 | + | +1.3 | |||
| 1,253,598 | + | +0.8 | |||
| 1,253,785 | - | MMP_RS06525 | 0.70 | +1.3 | |
| 1,253,873 | - | -0.9 | |||
| 1,253,876 | + | +1.7 | |||
| 1,254,182 | - | MMP_RS06530 | 0.21 | +0.7 | |
| 1,254,490 | - | MMP_RS06530 | 0.44 | -1.2 | |
| 1,254,492 | - | MMP_RS06530 | 0.44 | +1.7 | |
| 1,254,506 | + | MMP_RS06530 | 0.45 | -0.6 | |
| 1,254,506 | + | MMP_RS06530 | 0.45 | -3.1 | |
| 1,254,555 | - | MMP_RS06530 | 0.49 | +1.5 | |
| 1,254,598 | + | MMP_RS06530 | 0.52 | +1.4 | |
| 1,254,633 | + | MMP_RS06530 | 0.55 | +0.1 | |
| 1,254,652 | + | MMP_RS06530 | 0.56 | +0.9 |
Or see this region's nucleotide sequence