Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05890

Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
1,129,275	-				+0.3
1,129,470	-				-0.9
1,129,514	+				-0.1
1,129,600	+				-0.9
1,129,606	-				-1.1
1,129,607	+				-0.3
1,129,660	-				-2.2
1,129,934	-				-0.0
1,129,937	+				+0.5
1,129,937	+				-0.7
1,129,942	-				+0.9
1,129,986	+				-1.9
1,130,030	+				+1.6
1,130,066	+				-1.0
1,130,191	-				-1.6
1,130,195	+				+0.4
1,130,311	-				+0.3
1,130,364	+				-0.2
1,130,373	+				-0.0
1,130,374	-				+0.6
1,130,374	-				-0.2
1,130,375	+				+1.1
1,130,507	+		MMP_RS05890	0.13	+0.6
1,130,668	-		MMP_RS05890	0.20	+0.5
1,130,689	-		MMP_RS05890	0.21	-1.2
1,130,837	+		MMP_RS05890	0.26	-1.1
1,130,892	-		MMP_RS05890	0.28	+2.5
1,130,946	-		MMP_RS05890	0.31	+0.4
1,130,973	-		MMP_RS05890	0.32	+0.4
1,130,977	-		MMP_RS05890	0.32	+0.5
1,131,007	+		MMP_RS05890	0.33	-0.3
1,131,011	-		MMP_RS05890	0.33	+1.3
1,131,363	-		MMP_RS05890	0.47	-0.0
1,131,363	-		MMP_RS05890	0.47	+0.5
1,131,363	-		MMP_RS05890	0.47	+0.7
1,131,364	+		MMP_RS05890	0.47	+1.8
1,131,364	+		MMP_RS05890	0.47	+0.7
1,131,487	-		MMP_RS05890	0.52	-0.6
1,131,519	+		MMP_RS05890	0.53	-0.0
1,131,560	-		MMP_RS05890	0.54	-0.1
1,131,561	+		MMP_RS05890	0.54	+0.8
1,131,571	+		MMP_RS05890	0.55	+1.5
1,131,630	+		MMP_RS05890	0.57	+1.3
1,131,630	+		MMP_RS05890	0.57	+1.8
1,131,633	+		MMP_RS05890	0.57	-0.7
1,131,633	+		MMP_RS05890	0.57	-0.4
1,131,633	+		MMP_RS05890	0.57	+2.4
1,131,634	-		MMP_RS05890	0.57	-0.1
1,131,634	-		MMP_RS05890	0.57	-0.0
1,131,727	+		MMP_RS05890	0.61	+1.4
1,131,755	+		MMP_RS05890	0.62	+0.9
1,131,807	+		MMP_RS05890	0.64	-0.9
1,132,161	-		MMP_RS05890	0.78	-0.7
1,132,165	-		MMP_RS05890	0.78	-1.4
1,132,195	-		MMP_RS05890	0.79	-2.0
1,132,218	-		MMP_RS05890	0.80	-3.2
1,132,383	-		MMP_RS05890	0.86	+0.9
1,132,417	+		MMP_RS05890	0.88	+1.0
1,132,428	-		MMP_RS05890	0.88	-1.1
1,132,434	-		MMP_RS05890	0.88	-0.2
1,132,434	-		MMP_RS05890	0.88	-0.7
1,132,435	+		MMP_RS05890	0.89	-0.6
1,132,439	-		MMP_RS05890	0.89	+3.0
1,132,572	-				-0.1
1,132,573	+				-0.2
1,132,573	+				-0.1
1,132,687	-				+0.4
1,132,688	+				+0.5
1,132,727	-				+1.2
1,132,727	-				+1.7
1,132,739	-				+0.6
1,132,740	+				+1.5
1,132,802	-				+0.7
1,132,865	-		MMP_RS05895	0.19	+0.2
1,132,866	+		MMP_RS05895	0.19	+1.9
1,133,037	+		MMP_RS05895	0.43	+0.4
1,133,057	-		MMP_RS05895	0.46	+0.4
1,133,058	+		MMP_RS05895	0.46	-1.5
1,133,058	+		MMP_RS05895	0.46	-1.3
1,133,070	-		MMP_RS05895	0.48	+0.7
1,133,071	+		MMP_RS05895	0.48	-0.8
1,133,072	-		MMP_RS05895	0.48	-0.8
1,133,073	+		MMP_RS05895	0.48	+0.8
1,133,076	-		MMP_RS05895	0.48	-2.3
1,133,085	-		MMP_RS05895	0.50	-0.7
1,133,095	+		MMP_RS05895	0.51	-0.0
1,133,107	-		MMP_RS05895	0.53	+1.1
1,133,180	-		MMP_RS05895	0.63	-0.8
1,133,214	+		MMP_RS05895	0.68	+1.6
1,133,214	+		MMP_RS05895	0.68	+0.6
1,133,292	-		MMP_RS05895	0.79	-0.1
1,133,371	+		MMP_RS05895	0.90	+0.9
1,133,382	-				-1.0
1,133,586	-		MMP_RS05900	0.29	-0.1
1,133,586	-		MMP_RS05900	0.29	+0.4
1,133,592	-		MMP_RS05900	0.31	+1.3
1,133,593	+		MMP_RS05900	0.31	+1.6
1,133,599	-		MMP_RS05900	0.33	-0.1
1,133,599	-		MMP_RS05900	0.33	-1.8
1,133,600	+		MMP_RS05900	0.33	+0.4
1,133,600	+		MMP_RS05900	0.33	+0.2
1,133,605	-		MMP_RS05900	0.34	+0.7
1,133,709	-		MMP_RS05900	0.63	+0.9