Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS09795

Experiment: Mucin from porcine stomach type II 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mucin from porcine stomach type II 2.5 mg/ml (C)
793,097	-		HMPREF1058_RS09800	0.83	-0.6
793,348	+		HMPREF1058_RS09800	0.87	-0.1
793,425	+		HMPREF1058_RS09800	0.88	+1.0
793,720	+				-0.8
794,321	-		HMPREF1058_RS09795	0.50	-0.8
794,401	+		HMPREF1058_RS09795	0.68	+0.9
794,402	-		HMPREF1058_RS09795	0.68	-1.2
794,434	-		HMPREF1058_RS09795	0.75	-0.8
794,649	-				+0.3
794,649	-				+0.3
794,772	-				-0.4
794,773	+				+0.9
794,773	+				-0.1
794,774	-				+0.2
794,774	-				+0.1
794,846	+				+1.4
795,065	-		HMPREF1058_RS09790	0.17	+0.3
795,242	-		HMPREF1058_RS09790	0.26	+0.2
795,471	-		HMPREF1058_RS09790	0.36	+1.7
795,493	+		HMPREF1058_RS09790	0.38	+0.3