Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09765

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,214,647	+		BPHYT_RS09760	0.52	+1.1
2,214,773	+		BPHYT_RS09760	0.64	+2.1
2,215,149	+				+0.0
2,215,149	+				+0.4
2,215,483	-		BPHYT_RS09765	0.40	-0.8
2,215,549	+		BPHYT_RS09765	0.49	+1.9
2,215,550	-		BPHYT_RS09765	0.49	+1.0
2,215,732	+		BPHYT_RS09765	0.74	+0.1
2,216,064	+		BPHYT_RS09770	0.13	+0.3
2,216,134	-		BPHYT_RS09770	0.19	-0.9
2,216,482	-		BPHYT_RS09770	0.50	-1.3
2,216,485	-		BPHYT_RS09770	0.51	-0.1
2,216,485	-		BPHYT_RS09770	0.51	+0.8
2,216,812	-		BPHYT_RS09770	0.80	+0.1
2,216,812	-		BPHYT_RS09770	0.80	+0.1