Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04945

Experiment: Glucose (C) and nitrate (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and nitrate (N); with TAPS
1,106,332	+				-2.0
1,106,332	+				-0.1
1,106,332	+				+0.8
1,106,333	-				-1.6
1,106,333	-				-1.2
1,106,333	-				-0.4
1,106,333	-				+0.5
1,106,362	+				-1.3
1,106,362	+				+0.7
1,106,362	+				+0.2
1,106,362	+				-0.1
1,106,362	+				+0.5
1,106,362	+				-0.1
1,106,362	+				-1.1
1,106,363	-				+0.2
1,106,363	-				-0.7
1,106,363	-				+0.9
1,106,461	+				+0.2
1,106,461	+				+0.3
1,106,461	+				+2.2
1,106,461	+				-0.1
1,106,461	+				-1.7
1,106,462	-				-0.3
1,106,462	-				-0.6
1,106,462	-				-0.4
1,106,462	-				-0.0
1,106,465	+				+0.7
1,106,465	+				-1.6
1,106,465	+				+0.8
1,106,465	+				+0.1
1,106,466	-				-2.7
1,106,466	-				-0.8
1,106,466	-				+1.4
1,106,515	-				-0.8
1,106,520	+				-1.1
1,106,520	+				-0.6
1,106,520	+				+0.6
1,106,521	-				+0.1
1,106,521	-				-1.4
1,106,521	-				+2.2
1,106,545	+				+0.7
1,106,545	+				+2.7
1,106,545	+				+1.3
1,106,545	+				-1.8
1,106,546	-				-2.0
1,106,837	-		PFLU_RS04935	0.60	-0.6
1,106,921	+		PFLU_RS04935	0.78	-1.3
1,106,921	+		PFLU_RS04935	0.78	-0.3
1,106,922	-		PFLU_RS04935	0.78	-0.5
1,106,922	-		PFLU_RS04935	0.78	+0.2
1,106,922	-		PFLU_RS04935	0.78	+0.9
1,106,922	-		PFLU_RS04935	0.78	-0.2
1,106,940	+		PFLU_RS04935	0.82	-2.5
1,106,940	+		PFLU_RS04935	0.82	+0.3
1,106,940	+		PFLU_RS04935	0.82	-0.6
1,106,940	+		PFLU_RS04935	0.82	-2.3
1,106,941	-		PFLU_RS04935	0.82	+0.5
1,106,941	-		PFLU_RS04935	0.82	+0.8
1,106,941	-		PFLU_RS04935	0.82	+0.2
1,106,941	-		PFLU_RS04935	0.82	+1.2
1,106,965	+		PFLU_RS04935	0.87	-1.0
1,106,965	+		PFLU_RS04935	0.87	-1.4
1,106,966	-		PFLU_RS04935	0.87	-0.1
1,106,966	-		PFLU_RS04935	0.87	+0.7
1,106,993	-				+2.2
1,107,035	+				-1.3
1,107,035	+				-1.7
1,107,036	-				-1.3
1,107,036	-				-0.6
1,107,036	-				-0.2
1,107,036	-				-2.1
1,107,036	-				-2.6
1,107,036	-				-0.6
1,107,369	+		PFLU_RS04945	0.23	-1.8
1,107,370	-		PFLU_RS04945	0.23	-2.4
1,107,370	-		PFLU_RS04945	0.23	-0.6
1,107,370	-		PFLU_RS04945	0.23	-0.6
1,107,609	+		PFLU_RS04945	0.76	+0.9
1,107,609	+		PFLU_RS04945	0.76	-2.3
1,107,609	+		PFLU_RS04945	0.76	-1.1
1,107,610	-		PFLU_RS04945	0.76	+0.9
1,107,610	-		PFLU_RS04945	0.76	-0.9
1,107,714	+				+0.7
1,107,714	+				+0.1
1,107,715	-				+1.2
1,107,730	+				-1.6
1,107,730	+				-0.5
1,107,730	+				+0.7
1,107,730	+				-0.9
1,107,730	+				+0.4
1,107,731	-				+1.1
1,107,731	-				+2.2
1,107,731	-				-0.6
1,107,731	-				+0.4
1,107,813	-				+2.2
1,107,813	-				-2.3
1,107,813	-				-1.6
1,107,813	-				+0.2
1,107,813	-				+1.2
1,107,813	-				-1.7
1,107,813	-				+1.2
1,107,866	-				+1.8
1,107,882	+				-0.7
1,107,883	-				-0.8
1,107,894	+				+1.2
1,107,894	+				+1.7
1,107,895	-				-0.6
1,107,895	-				+1.0
1,107,895	-				-0.5
1,107,895	-				+0.5
1,107,895	-				+0.7
1,107,895	-				-0.7
1,107,895	-				+0.8
1,107,895	-				-0.1
1,107,895	-				+0.9
1,107,895	-				-0.6
1,107,961	+				-0.6
1,107,961	+				-0.4
1,107,961	+				-2.2
1,107,961	+				-0.8
1,107,962	-				-0.2
1,107,962	-				-0.1
1,107,962	-				-0.3
1,107,962	-				+0.0
1,108,020	-		PFLU_RS04950	0.11	+0.4
1,108,020	-		PFLU_RS04950	0.11	+1.8
1,108,020	-		PFLU_RS04950	0.11	-1.1
1,108,039	+		PFLU_RS04950	0.12	+0.2
1,108,039	+		PFLU_RS04950	0.12	+0.8
1,108,039	+		PFLU_RS04950	0.12	+0.7
1,108,039	+		PFLU_RS04950	0.12	-1.0
1,108,040	-		PFLU_RS04950	0.12	+0.1
1,108,040	-		PFLU_RS04950	0.12	-0.6
1,108,040	-		PFLU_RS04950	0.12	+1.2
1,108,040	-		PFLU_RS04950	0.12	+0.3
1,108,113	+		PFLU_RS04950	0.17	-1.3
1,108,113	+		PFLU_RS04950	0.17	+0.2
1,108,315	+		PFLU_RS04950	0.31	-1.2
1,108,315	+		PFLU_RS04950	0.31	-1.1
1,108,315	+		PFLU_RS04950	0.31	+0.2
1,108,315	+		PFLU_RS04950	0.31	-0.3
1,108,315	+		PFLU_RS04950	0.31	-1.3
1,108,315	+		PFLU_RS04950	0.31	-0.1
1,108,316	-		PFLU_RS04950	0.31	+1.7
1,108,316	-		PFLU_RS04950	0.31	-0.6
1,108,316	-		PFLU_RS04950	0.31	-0.6
1,108,316	-		PFLU_RS04950	0.31	-0.1
1,108,327	+		PFLU_RS04950	0.31	-2.4
1,108,327	+		PFLU_RS04950	0.31	+0.2
1,108,327	+		PFLU_RS04950	0.31	-0.3
1,108,327	+		PFLU_RS04950	0.31	+0.0
1,108,327	+		PFLU_RS04950	0.31	+0.8
1,108,327	+		PFLU_RS04950	0.31	+1.4
1,108,327	+		PFLU_RS04950	0.31	-1.8
1,108,327	+		PFLU_RS04950	0.31	+0.9
1,108,327	+		PFLU_RS04950	0.31	-1.0
1,108,328	-		PFLU_RS04950	0.32	-0.8
1,108,328	-		PFLU_RS04950	0.32	+0.2
1,108,328	-		PFLU_RS04950	0.32	-2.0
1,108,351	+		PFLU_RS04950	0.33	+0.2
1,108,351	+		PFLU_RS04950	0.33	+0.0
1,108,351	+		PFLU_RS04950	0.33	-0.5
1,108,351	+		PFLU_RS04950	0.33	+0.3
1,108,351	+		PFLU_RS04950	0.33	+0.4
1,108,351	+		PFLU_RS04950	0.33	-0.3
1,108,351	+		PFLU_RS04950	0.33	-0.0
1,108,351	+		PFLU_RS04950	0.33	+0.6
1,108,351	+		PFLU_RS04950	0.33	+0.3
1,108,351	+		PFLU_RS04950	0.33	+0.5
1,108,351	+		PFLU_RS04950	0.33	-0.1
1,108,352	-		PFLU_RS04950	0.33	-0.8
1,108,352	-		PFLU_RS04950	0.33	+0.4
1,108,352	-		PFLU_RS04950	0.33	-0.1
1,108,352	-		PFLU_RS04950	0.33	-1.3
1,108,352	-		PFLU_RS04950	0.33	-0.6
1,108,352	-		PFLU_RS04950	0.33	-0.9
1,108,352	-		PFLU_RS04950	0.33	-0.0
1,108,352	-		PFLU_RS04950	0.33	-1.2
1,108,355	+		PFLU_RS04950	0.33	-1.1
1,108,355	+		PFLU_RS04950	0.33	+0.5
1,108,355	+		PFLU_RS04950	0.33	-1.3
1,108,355	+		PFLU_RS04950	0.33	+0.5
1,108,355	+		PFLU_RS04950	0.33	+0.4
1,108,355	+		PFLU_RS04950	0.33	+0.2
1,108,355	+		PFLU_RS04950	0.33	+1.2
1,108,355	+		PFLU_RS04950	0.33	-1.1
1,108,355	+		PFLU_RS04950	0.33	+0.4
1,108,355	+		PFLU_RS04950	0.33	-1.2
1,108,355	+		PFLU_RS04950	0.33	+0.2
1,108,355	+		PFLU_RS04950	0.33	+0.5
1,108,355	+		PFLU_RS04950	0.33	+0.1
1,108,355	+		PFLU_RS04950	0.33	-0.6
1,108,355	+		PFLU_RS04950	0.33	+0.4
1,108,355	+		PFLU_RS04950	0.33	+2.0
1,108,355	+		PFLU_RS04950	0.33	-0.2
1,108,355	+		PFLU_RS04950	0.33	+0.7
1,108,355	+		PFLU_RS04950	0.33	-0.6
1,108,355	+		PFLU_RS04950	0.33	+1.2
1,108,355	+		PFLU_RS04950	0.33	+1.0
1,108,355	+		PFLU_RS04950	0.33	-0.1
1,108,355	+		PFLU_RS04950	0.33	-0.0
1,108,355	+		PFLU_RS04950	0.33	-0.8
1,108,356	-		PFLU_RS04950	0.33	-0.7
1,108,356	-		PFLU_RS04950	0.33	+3.0
1,108,356	-		PFLU_RS04950	0.33	+0.2
1,108,356	-		PFLU_RS04950	0.33	+1.1
1,108,356	-		PFLU_RS04950	0.33	-0.1
1,108,356	-		PFLU_RS04950	0.33	-1.2
1,108,356	-		PFLU_RS04950	0.33	+1.0
1,108,356	-		PFLU_RS04950	0.33	-0.1
1,108,356	-		PFLU_RS04950	0.33	-0.9
1,108,356	-		PFLU_RS04950	0.33	+0.7
1,108,356	-		PFLU_RS04950	0.33	+0.4
1,108,356	-		PFLU_RS04950	0.33	-0.1
1,108,356	-		PFLU_RS04950	0.33	+0.7
1,108,356	-		PFLU_RS04950	0.33	+0.4
1,108,356	-		PFLU_RS04950	0.33	+0.2
1,108,356	-		PFLU_RS04950	0.33	+0.3
1,108,356	-		PFLU_RS04950	0.33	-0.6
1,108,356	-		PFLU_RS04950	0.33	-0.0
1,108,356	-		PFLU_RS04950	0.33	+0.4
1,108,356	-		PFLU_RS04950	0.33	+0.3
1,108,356	-		PFLU_RS04950	0.33	-0.2
1,108,356	-		PFLU_RS04950	0.33	-1.7
1,108,356	-		PFLU_RS04950	0.33	+0.6
1,108,356	-		PFLU_RS04950	0.33	+0.6
1,108,532	+		PFLU_RS04950	0.45	+1.0
1,108,532	+		PFLU_RS04950	0.45	+0.9